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L3_072_243G1_scaffold_368

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_368_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(74..2050)
DNA (1977bp) protein (659aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
threonyl-tRNA synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FF997C
L3_072_243G1_scaffold_368_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2589..3644
DNA (1056bp) protein (352aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH2_9FIRM
L3_072_243G1_scaffold_368_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3660..4160
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76594.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L3_072_243G1_scaffold_368_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4599..5996
DNA (1398bp) protein (466aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcription termination factor Rho n=2 Tax=Ruminococcus RepID=C6JEH4_9FIRM
transcription termination factor Rho
L3_072_243G1_scaffold_368_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6185..6388
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=2 Tax=Ruminococcus RepID=C6JEH5_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L31P
L3_072_243G1_scaffold_368_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6463..7431
DNA (969bp) protein (323aa)
Predicted metal-dependent enzyme n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCX0_9FIRM
Predicted metal-dependent enzyme {ECO:0000313|EMBL:CDD76059.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted metal-dependent enzyme
L3_072_243G1_scaffold_368_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7428..8393
DNA (966bp) protein (322aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Release factor glutamine methyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH6_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_072_243G1_scaffold_368_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8386..9462
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH7_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_072_243G1_scaffold_368_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9543..10460
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76599.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
dTDP-glucose pyrophosphorylase
L3_072_243G1_scaffold_368_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10592..11938
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Ruminococcus RepID=C6JEH9_9FIRM
L3_072_243G1_scaffold_368_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11959..13008
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76047.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_368_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13033..14268
DNA (1236bp) protein (412aa)
GTPase HflX n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEI1_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GTP-binding protein HflX
L3_072_243G1_scaffold_368_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14486..16864
DNA (2379bp) protein (793aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Ruminococcus RepID=C6JEI2_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDD76045.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_368_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16899..17327
DNA (429bp) protein (143aa)
Amino acid-binding ACT domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFD5_9FIRM
Amino acid-binding ACT domain-containing protein {ECO:0000313|EMBL:CDD76043.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ACT domain-containing protein
L3_072_243G1_scaffold_368_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17493..17927
DNA (435bp) protein (145aa)
Rrf2 family protein n=2 Tax=Ruminococcus RepID=C6JEI4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD76041.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, BadM/Rrf2 family
L3_072_243G1_scaffold_368_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18019..18948
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEI5_9FIRM
L3_072_243G1_scaffold_368_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19131..20213
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCU9_9FIRM
L3_072_243G1_scaffold_368_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20483..21796
DNA (1314bp) protein (438aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76038.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_368_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22103..22957
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76037.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_368_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22902..23066
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LVD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98774.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_368_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23012..23434
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76036.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fe2+/Zn2+ uptake regulation proteins
L3_072_243G1_scaffold_368_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23582..24586
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76035.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L3_072_243G1_scaffold_368_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24719..25444
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76612.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_072_243G1_scaffold_368_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25434..25751
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76613.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Branched-chain amino acid transport protein (AzlD).
L3_072_243G1_scaffold_368_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25880..26731)
DNA (852bp) protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE80_9FIRM
L3_072_243G1_scaffold_368_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27066..27854
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LW37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98772.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_072_243G1_scaffold_368_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27925..28632
DNA (708bp) protein (236aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYN8_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EQM98771.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid ABC transporter permease
L3_072_243G1_scaffold_368_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28622..29362
DNA (741bp) protein (247aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEJ5_9FIRM
Polar amino acid ABC transporter {ECO:0000313|EMBL:CDD76029.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_368_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29364..30314
DNA (951bp) protein (317aa)
Sodium Bile acid symporter family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFC0_9FIRM
Sodium Bile acid symporter family protein {ECO:0000313|EMBL:CDD76028.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted Na+-dependent transporter
L3_072_243G1_scaffold_368_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30393..30818)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76027.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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