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L3_072_243G1_scaffold_383

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_383_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(192..1376)
DNA (1185bp) protein (395aa)
Putative hemolysin n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAG3_BIFBI
Putative hemolysin {ECO:0000313|EMBL:EFR50605.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
aspartate aminotransferase
L3_072_243G1_scaffold_383_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1806..3119)
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M3H2_BIFBI
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
clpX; ATP-dependent Clp protease ATP-binding subunit clpX
L3_072_243G1_scaffold_383_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3220..3939)
DNA (720bp) protein (240aa)
clpP2; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bifidobacterium bifidum RepID=E4NXK9_BIFBP
L3_072_243G1_scaffold_383_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3945..4526)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent Clp protease proteolytic subunit n=8 Tax=Bifidobacterium RepID=E3EME7_BIFBS
clp1; ATP-dependent Clp protease proteolytic subunit 1
L3_072_243G1_scaffold_383_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5062..6465)
DNA (1404bp) protein (468aa)
Chloride channel protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL1_BIFBP
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:CDB21960.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_383_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6671..8056)
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Trigger factor n=5 Tax=Bifidobacterium RepID=E3EME9_BIFBS
tig; trigger factor Tig
L3_072_243G1_scaffold_383_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8109..9395)
DNA (1287bp) protein (429aa)
ribonuclease D (EC:3.1.13.5)
3'-5' exonuclease n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DVA5_BIFBI
3'-5' exonuclease {ECO:0000313|EMBL:ERI83691.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98428.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_243G1_scaffold_383_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9385..10014)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=U2DQ50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50612.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_072_243G1_scaffold_383_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10111..10992)
DNA (882bp) protein (294aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium RepID=I3WIP9_BIFBI
L3_072_243G1_scaffold_383_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11184..13559)
DNA (2376bp) protein (792aa)
pflB; formate acetyl transferase (EC:2.3.1.54)
Formate acetyltransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EMF3_BIFBS
Formate C-acetyltransferase {ECO:0000313|EMBL:ERI83694.1}; Formate acetyltransferase {ECO:0000313|EMBL:BAQ98431.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_243G1_scaffold_383_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13679..13915)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR50615.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_243G1_scaffold_383_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13993..15690)
DNA (1698bp) protein (566aa)
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:AFL04765.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AFL04765.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase n=3 Tax=Bifidobacterium bifidum RepID=I3WIQ2_BIFBI
L3_072_243G1_scaffold_383_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15773..16924)
DNA (1152bp) protein (384aa)
Amidohydrolase n=3 Tax=Bifidobacterium bifidum RepID=U2DQ53_BIFBI
ytnL; putative hydrolase
Amidohydrolase {ECO:0000313|EMBL:ERI83697.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98434.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_243G1_scaffold_383_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16961..17512)
DNA (552bp) protein (184aa)
Methionine import ATP-binding protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ4_BIFBI
metN; methionine import ATP-binding protein
Methionine import ATP-binding protein {ECO:0000313|EMBL:AFL04767.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_243G1_scaffold_383_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17664..18515
DNA (852bp) protein (284aa)
Hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium bifidum RepID=E3EMF8_BIFBS
hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ADO53394.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18661..19200)
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bifidobacterium RepID=E3EMF9_BIFBS
peptidyl-prolyl cis-trans isomerase
L3_072_243G1_scaffold_383_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19342..19638
DNA (297bp) protein (99aa)
Addiction module antitoxin, RelB/DinJ family protein n=4 Tax=Bifidobacterium bifidum RepID=E3EMG0_BIFBS
DNA-damage-inducible protein J
Uncharacterized protein {ECO:0000313|EMBL:KFI43263.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_243G1_scaffold_383_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19631..19861
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIV4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04817.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_243G1_scaffold_383_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19819..20319)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI43266.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_243G1_scaffold_383_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21007..22095
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=I3WIV5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04818.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_243G1_scaffold_383_21
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22105..22560
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D0J8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI50872.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L3_072_243G1_scaffold_383_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22614..22928
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMG4_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53400.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22970..24250
DNA (1281bp) protein (427aa)
HipA domain containing protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LEB9_BIFBI
HipA domain containing protein {ECO:0000313|EMBL:EKF16084.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
HipA domain
L3_072_243G1_scaffold_383_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24339..26870
DNA (2532bp) protein (844aa)
N-6 DNA methylase n=2 Tax=Bifidobacterium bifidum RepID=K2M4V3_BIFBI
N-6 DNA methylase
Putative N-6 DNA methylase {ECO:0000313|EMBL:ADO53402.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27208..27930)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M275_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53403.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28048..28431
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2MFW9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53404.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28679..28894)
DNA (216bp) protein (72aa)
Putative phage integrase family protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMG9_BIFBS
phage integrase
Putative phage integrase family protein {ECO:0000313|EMBL:ADO53405.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29088..29279
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAK1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53406.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_383_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29279..29740
DNA (462bp) protein (154aa)
Putative uncharacterized protein ficl n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMX3_BIFBS
ficl; Fic family protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53407.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying 29 items

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