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L3_072_243G1_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_481_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(608..712)
DNA (105bp) protein (35aa)
Uncharacterised protein {ECO:0000313|EMBL:CKG89584.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_243G1_scaffold_481_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1053..1214)
DNA (162bp) protein (54aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6BAI6_CLODI
hypothetical protein
Putative phage protein {ECO:0000313|EMBL:CAJ69798.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_243G1_scaffold_481_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1361..1480)
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PS47_CLODI
putative phage protein
ABC-type transport system,ATP-binding protein {ECO:0000313|EMBL:CEJ99519.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_243G1_scaffold_481_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1555..1995)
DNA (441bp) protein (147aa)
Phage protein n=83 Tax=Clostridium difficile RepID=C9XSR5_CLODC
phage protein
Putative XkdN-like phage protein {ECO:0000313|EMBL:CCL29012.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_243G1_scaffold_481_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2067..2537)
DNA (471bp) protein (157aa)
Phage-like element PBSX protein xkdM n=70 Tax=Clostridium difficile RepID=T2U9T5_CLODI
putative phage protein
Phage-like element PBSX protein xkdM {ECO:0000313|EMBL:EQG76040.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_243G1_scaffold_481_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2554..3864)
DNA (1311bp) protein (437aa)
Phage tail sheath family protein n=2 Tax=Clostridium difficile RepID=T4PSF2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27728.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
putative phage protein
L3_072_243G1_scaffold_481_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3865..4050)
DNA (186bp) protein (62aa)
Putative phage protein n=1 Tax=Clostridium difficile E13 RepID=U3VTT7_CLODI
Putative phage protein {ECO:0000313|EMBL:CCL00900.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
putative phage protein
L3_072_243G1_scaffold_481_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4034..4471)
DNA (438bp) protein (146aa)
Putative phage protein n=2 Tax=Clostridium difficile RepID=T4PS51_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ25482.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
putative phage protein
L3_072_243G1_scaffold_481_9
Clostridium phage CDMH1, Caudovirales, Viruses

Not on your lists

comp(4464..4889)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PS68_CLODI
Putative tail protein {ECO:0000313|EMBL:CDI66631.1}; TaxID=1411095 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage CDMH1.;"
putative phage protein
L3_072_243G1_scaffold_481_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4889..5236)
DNA (348bp) protein (116aa)
Uncharacterized protein n=55 Tax=Clostridium difficile RepID=G6BAT8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ27724.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_243G1_scaffold_481_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5230..5631)
DNA (402bp) protein (134aa)
Uncharacterized protein n=56 Tax=Clostridium difficile RepID=G6BNS7_CLODI
hypothetical protein
Putative phage protein {ECO:0000313|EMBL:CEJ97504.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_243G1_scaffold_481_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5641..5874)
DNA (234bp) protein (78aa)
Putative phage protein n=6 Tax=Clostridium difficile RepID=T2UTE2_CLODI
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CDT82495.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG89325.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_243G1_scaffold_481_13
Clostridium phage phiMMP03, Caudovirales, Viruses

Not on your lists

comp(5874..6773)
DNA (900bp) protein (300aa)
Putative phage major capsid protein n=2 Tax=Clostridium difficile RepID=T4PS56_CLODI
Capsid protein {ECO:0000313|EMBL:CEK40842.1}; TaxID=1582157 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiMMP03.;"
putative phage major capsid protein
L3_072_243G1_scaffold_481_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6785..7348)
DNA (564bp) protein (188aa)
Phage minor structural GP20 family protein n=2 Tax=Clostridium difficile RepID=T4PS72_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27720.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
putative phage scaffold protein
L3_072_243G1_scaffold_481_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7658..7900)
DNA (243bp) protein (81aa)
Uncharacterized protein n=67 Tax=Clostridium difficile RepID=T3CM96_CLODI
Putative phage protein {ECO:0000313|EMBL:CDS92708.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG89220.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS85253.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative phage protein
L3_072_243G1_scaffold_481_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7866..9359)
DNA (1494bp) protein (498aa)
Phage protein F-like protein n=21 Tax=Clostridium difficile RepID=G6BAT2_CLODI
head protein
Putative phage head protein {ECO:0000313|EMBL:CAJ69811.1}; Putative phage minor head protein {ECO:0000313|EMBL:CAJ67783.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_243G1_scaffold_481_17
Clostridium phage phiMMP01, Caudovirales, Viruses

Not on your lists

comp(9349..10788)
DNA (1440bp) protein (480aa)
Phage portal protein, SPP1 family n=2 Tax=Clostridium difficile RepID=T4PL99_CLODI
Phage portal protein, SPP1 family {ECO:0000313|EMBL:CEK40757.1}; TaxID=1582156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiMMP01.;"
putative phage portal protein
L3_072_243G1_scaffold_481_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10794..12047)
DNA (1254bp) protein (418aa)
Phage terminase, large subunit, PBSX family n=3 Tax=Clostridium difficile RepID=T4ZG26_CLODI
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EHJ27716.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
phage terminase large subunit
L3_072_243G1_scaffold_481_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12025..12756)
DNA (732bp) protein (244aa)
ATPase subunit of terminase family protein n=2 Tax=Clostridium difficile RepID=T4PS78_CLODI
ATPase subunit of terminase family protein {ECO:0000313|EMBL:EQG75659.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative phage DNA-binding protein
L3_072_243G1_scaffold_481_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12767..13426)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4ZFA0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23660.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_072_243G1_scaffold_481_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13538..14974)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PSG8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEC91305.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_243G1_scaffold_481_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14999..16039)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PLA5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEC91306.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_243G1_scaffold_481_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16575..16751)
DNA (177bp) protein (59aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T2VQP1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24328.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative PemI
L3_072_243G1_scaffold_481_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16766..16879)
DNA (114bp) protein (38aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=U3VXF8_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE65996.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_243G1_scaffold_481_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17161..17661)
DNA (501bp) protein (167aa)
Uncharacterized protein n=54 Tax=Clostridium difficile RepID=T2V0Q5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS83033.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_243G1_scaffold_481_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17680..18096)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PLB0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS84663.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_072_243G1_scaffold_481_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18123..18320)
DNA (198bp) protein (66aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=T2V3I3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66018.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_072_243G1_scaffold_481_28
Clostridium phage phiCD24-1, Caudovirales, Viruses

Not on your lists

comp(18352..18480)
DNA (129bp) protein (43aa)
Putative phage protein n=3 Tax=Clostridium difficile RepID=T2V186_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CEK40268.1}; TaxID=1582149 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCD24-1.;"
putative phage protein
L3_072_243G1_scaffold_481_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18496..18615)
DNA (120bp) protein (40aa)
Putative phage protein n=2 Tax=Clostridium difficile RepID=T4PTD6_CLODI
Putative phage protein {ECO:0000313|EMBL:EQH99938.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative phage protein
L3_072_243G1_scaffold_481_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18599..18733)
DNA (135bp) protein (45aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2UED0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66035.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Displaying items 1-30 of 42 in total

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