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L3_072_243G1_scaffold_512

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_512_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1236
DNA (1236bp) protein (412aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
ATP-dependent helicase n=1 Tax=Escherichia coli RepID=UPI000362CEA8
hepA; ATP-dependent helicase HepA
L3_072_243G1_scaffold_512_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1248..1907
DNA (660bp) protein (220aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
Pseudouridine synthase n=6 Tax=Escherichia coli RepID=B3XIN0_ECOLX
ribosomal large subunit pseudouridine synthase A
L3_072_243G1_scaffold_512_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2025..2906)
DNA (882bp) protein (294aa)
DnaJ-like protein DjlA n=1 Tax=Escherichia coli UMEA 3656-1 RepID=T9NRT7_ECOLX
DnaJ-like protein DjlA {ECO:0000256|HAMAP-Rule:MF_01153}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
djlA; Dna-J like membrane chaperone protein
L3_072_243G1_scaffold_512_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3095..5449
DNA (2355bp) protein (785aa)
LPS-assembly protein LptD n=102 Tax=Escherichia coli RepID=LPTD_ECOL5
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
organic solvent tolerance protein
L3_072_243G1_scaffold_512_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5502..6788
DNA (1287bp) protein (429aa)
peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8)
Chaperone SurA n=1232 Tax=Enterobacteriaceae RepID=SURA_ECO57
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L3_072_243G1_scaffold_512_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6788..7777
DNA (990bp) protein (330aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=40 Tax=Escherichia coli RepID=B3HXT1_ECOLX
L3_072_243G1_scaffold_512_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7774..8595
DNA (822bp) protein (274aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Ribosomal RNA small subunit methyltransferase A n=337 Tax=Escherichia RepID=RSMA_ECO27
L3_072_243G1_scaffold_512_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8598..8975
DNA (378bp) protein (126aa)
Protein ApaG n=1175 Tax=Enterobacteriaceae RepID=APAG_ECO24
Co2+ and Mg2+ efflux associated protein ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_072_243G1_scaffold_512_9
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8982..9830
DNA (849bp) protein (283aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine tetraphosphatase {ECO:0000256|HAMAP-Rule:MF_00199}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=113 Tax=Escherichia RepID=APAH_ECO81
L3_072_243G1_scaffold_512_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9827..10141)
DNA (315bp) protein (105aa)
Toxin of gyrase inhibiting toxin-antitoxin system n=293 Tax=Escherichia RepID=E2QEX9_ECOLX
CcdB-like protein
CcdB family protein {ECO:0000313|EMBL:EHU49386.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_072_243G1_scaffold_512_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10144..10377)
DNA (234bp) protein (78aa)
Conserved domain protein n=66 Tax=Escherichia coli RepID=B3HXT6_ECOLX
putative antitoxin of gyrase inhibiting toxin-antitoxin system
Uncharacterized protein {ECO:0000313|EMBL:EOU83519.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L3_072_243G1_scaffold_512_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10463..11053)
DNA (591bp) protein (197aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
dihydrofolate reductase n=1 Tax=Escherichia coli RepID=UPI000366A1F6
Dihydrofolate reductase {ECO:0000313|EMBL:KDH01112.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_072_243G1_scaffold_512_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11134..12996)
DNA (1863bp) protein (621aa)
Glutathione-regulated potassium-efflux system protein KefC n=39 Tax=Escherichia coli RepID=KEFC_ECOL5
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000255|HAMAP-Rule:MF_01413}; K(+)/H(+) antiporter {ECO:0000255|HAMAP-Rule:MF_01413}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
glutathione-regulated potassium-efflux system protein KefC
L3_072_243G1_scaffold_512_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12989..13519)
DNA (531bp) protein (177aa)
glutathione-regulated potassium-efflux system ancillary protein KefF (EC:1.6.99.-)
Glutathione-regulated potassium-efflux system ancillary protein KefF n=54 Tax=Escherichia RepID=KEFF_ECOL5
Glutathione-regulated potassium-efflux system ancillary protein KefF {ECO:0000256|HAMAP-Rule:MF_01414}; Quinone oxidoreductase KefF {ECO:0000256|HAMAP-Rule:MF_01414}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_243G1_scaffold_512_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13627..14958)
DNA (1332bp) protein (444aa)
Putative metabolite transport protein YaaU n=611 Tax=Enterobacteriaceae RepID=YAAU_ECOLI
transporter
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KDZ41499.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_072_243G1_scaffold_512_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15017..15304)
DNA (288bp) protein (96aa)
Ferredoxin-like protein FixX n=1153 Tax=Enterobacteriaceae RepID=FIXX_ECO57
fixX; ferredoxin-like protein FixX
Ferredoxin-like protein fixX {ECO:0000313|EMBL:EHP65186.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_072_243G1_scaffold_512_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15301..16587)
DNA (1287bp) protein (429aa)
Protein FixC n=670 Tax=Enterobacteriaceae RepID=FIXC_ECOL6
fixC; putative oxidoreductase with FAD/NAD(P)-binding domain
FAD binding domain protein {ECO:0000313|EMBL:EHU33914.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_072_243G1_scaffold_512_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16638..17579)
DNA (942bp) protein (314aa)
Protein FixB n=25 Tax=Escherichia coli RepID=FIXB_ECOL5
fixB; electron transfer flavoprotein FixB
Protein FixB {ECO:0000255|HAMAP-Rule:MF_01056}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
L3_072_243G1_scaffold_512_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17594..18364)
DNA (771bp) protein (257aa)
Protein FixA n=68 Tax=Escherichia coli RepID=FIXA_ECO81
fixA; putative electron transfer flavoprotein FixA
Protein FixA {ECO:0000255|HAMAP-Rule:MF_01055}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_072_243G1_scaffold_512_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18837..20351
DNA (1515bp) protein (505aa)
L-carnitine/gamma-butyrobetaine antiporter n=235 Tax=Escherichia coli RepID=CAIT_ECO27
L-carnitine/gamma-butyrobetaine antiporter {ECO:0000256|HAMAP-Rule:MF_01049}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
putative carnitine transporter
L3_072_243G1_scaffold_512_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20382..21524
DNA (1143bp) protein (381aa)
crotonobetainyl-CoA dehydrogenase (EC:1.3.99.-)
Crotonobetainyl-CoA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01052}; EC=1.3.99.- {ECO:0000255|HAMAP-Rule:MF_01052};; Crotonobetainyl-CoA reductase {ECO:0000255|HAMAP-Rule:MF_01052}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Crotonobetainyl-CoA dehydrogenase n=25 Tax=Escherichia coli RepID=CAIA_ECOL5
L3_072_243G1_scaffold_512_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21640..22125
DNA (486bp) protein (162aa)
L-carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; EC=2.8.3.21 {ECO:0000256|HAMAP-Rule:MF_01050};; Crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
Crotonobetainyl-CoA:carnitine CoA-transferase n=2 Tax=Escherichia coli RepID=L3RT35_ECOLX
crotonobetainyl-CoA:carnitine CoA-transferase
Displaying 22 items

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