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L3_072_243G1_scaffold_698

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_698_1
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..132
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Shigella RepID=I6CZH3_SHIBO
Putative uncharacterized protein {ECO:0000313|EMBL:EGI89712.1}; TaxID=766142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 155-74.;"
L3_072_243G1_scaffold_698_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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213..1208
DNA (996bp) protein (332aa)
Acyltransferase family protein n=26 Tax=Escherichia coli RepID=B3HMM6_ECOLX
Inner membrane protein YiaH {ECO:0000313|EMBL:EGI48807.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
hypothetical protein
L3_072_243G1_scaffold_698_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1249..1686)
DNA (438bp) protein (146aa)
Inner membrane protein yiaA n=311 Tax=Escherichia coli RepID=E2QGS4_ECOLX
yiaA; Inner membrane protein yiaA
Inner membrane protein yiaA {ECO:0000313|EMBL:ELJ67065.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_243G1_scaffold_698_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1732..2073)
DNA (342bp) protein (114aa)
Inner membrane protein yiaB n=373 Tax=Escherichia RepID=E2QGS5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR05190.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_072_243G1_scaffold_698_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2242..3696)
DNA (1455bp) protein (485aa)
Xylulose kinase {ECO:0000313|EMBL:CKG99059.1}; EC=2.7.1.17 {ECO:0000313|EMBL:CKG99059.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Xylulose kinase n=104 Tax=Escherichia RepID=A1AHA6_ECOK1
xylB; xylulokinase
L3_072_243G1_scaffold_698_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3768..5090)
DNA (1323bp) protein (441aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
Xylose isomerase n=678 Tax=Enterobacteriaceae RepID=XYLA_ECO27
L3_072_243G1_scaffold_698_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5456..6448
DNA (993bp) protein (331aa)
D-xylose-binding periplasmic protein n=728 Tax=Enterobacteriaceae RepID=E2QGS8_ECOLX
xylF; D-xylose transporter subunit XylF
D-xylose ABC transporter {ECO:0000313|EMBL:EFF11141.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_072_243G1_scaffold_698_8
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6526..8067
DNA (1542bp) protein (514aa)
Xylose import ATP-binding protein XylG {ECO:0000256|HAMAP-Rule:MF_01722}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01722};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Xylose import ATP-binding protein XylG n=210 Tax=Escherichia RepID=XYLG_ECOL5
xylose transporter ATP-binding subunit
L3_072_243G1_scaffold_698_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8045..9226
DNA (1182bp) protein (394aa)
Xylose transport system permease protein XylH n=1077 Tax=Enterobacteriaceae RepID=XYLH_ECO57
xylH; Xylose ABC transporter, membrane component XylH
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KDZ38326.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_072_243G1_scaffold_698_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9304..10482
DNA (1179bp) protein (393aa)
Xylose operon regulatory protein n=1170 Tax=Enterobacteriaceae RepID=XYLR_ECO57
AraC family transcriptional regulator
Xylose operon regulatory protein {ECO:0000313|EMBL:EOV53591.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_072_243G1_scaffold_698_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10590..11414)
DNA (825bp) protein (275aa)
Protein bax n=1265 Tax=Enterobacteriaceae RepID=BAX_ECOLI
hypothetical protein
Bax protein {ECO:0000313|EMBL:ELI21021.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_072_243G1_scaffold_698_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11734..13764
DNA (2031bp) protein (677aa)
malS; periplasmic alpha-amylase (EC:3.2.1.1)
Alpha-amylase {ECO:0000313|EMBL:ABE09541.1}; EC=3.2.1.1 {ECO:0000313|EMBL:ABE09541.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Alpha-amylase n=137 Tax=Enterobacteriaceae RepID=E1PJ79_ECOAB
L3_072_243G1_scaffold_698_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13942..15156
DNA (1215bp) protein (405aa)
avtA; valine--pyruvate aminotransferase (EC:2.6.1.66)
Valine--pyruvate aminotransferase n=451 Tax=Enterobacteriaceae RepID=E2QGT4_ECOLX
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:EHP63785.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Displaying 13 items

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