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L3_072_243G1_scaffold_861

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_861_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..236)
DNA (234bp) protein (78aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Escherichia coli RepID=L4CNB8_ECOLX
L3_072_243G1_scaffold_861_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(238..687)
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase n=1341 Tax=Enterobacteriaceae RepID=FKBX_ECO57
FKBX-type 16KD peptidyl-prolyl cis-trans isomerase SlpA
L3_072_243G1_scaffold_861_3
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(795..1289)
DNA (495bp) protein (165aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
Lipoprotein signal peptidase n=56 Tax=Escherichia RepID=LSPA_ECOL5
L3_072_243G1_scaffold_861_4
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1289..4015)
DNA (2727bp) protein (909aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1393735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus temperata subsp. temperata Meg1.;"
Isoleucine--tRNA ligase n=1 Tax=Photorhabdus temperata J3 RepID=U7R2M8_PHOTE
Isoleucyl-tRNA synthetase
L3_072_243G1_scaffold_861_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4058..4999)
DNA (942bp) protein (314aa)
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
Riboflavin biosynthesis protein RibF n=886 Tax=Enterobacteriaceae RepID=RIBF_ECO57
L3_072_243G1_scaffold_861_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5328..5591
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1446 Tax=Bacteria RepID=RS20_ECO24
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_072_243G1_scaffold_861_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5648..6529)
DNA (882bp) protein (294aa)
Transcriptional activator protein nhaR n=326 Tax=Escherichia RepID=E2QEA9_ECOLX
nhaR; transcriptional activator NhaR
Transcriptional activator protein nhaR {ECO:0000313|EMBL:EOW90264.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_243G1_scaffold_861_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6595..7761)
DNA (1167bp) protein (389aa)
Na(+)/H(+) antiporter NhaA n=137 Tax=Escherichia RepID=NHAA_ECOL5
nhaA; pH-dependent sodium/proton antiporter
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L3_072_243G1_scaffold_861_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7996..9255)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=B3HZ81_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH63117.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_243G1_scaffold_861_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..10877)
DNA (1494bp) protein (498aa)
Arylsulfatase n=33 Tax=Escherichia coli RepID=D8BI00_ECOLX
secreted sulfatase
Uncharacterized protein {ECO:0000313|EMBL:BAI53558.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_072_243G1_scaffold_861_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10897..11658)
DNA (762bp) protein (254aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=D8BHZ9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU19970.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_072_243G1_scaffold_861_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12273..12425
DNA (153bp) protein (51aa)
Regulatory protein n=2 Tax=Escherichia coli RepID=V8ITV3_ECOLX
mokC; regulatory protein for HokC, overlaps CDS of HokC
Protein hokC {ECO:0000313|EMBL:ELC92261.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
L3_072_243G1_scaffold_861_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12530..13660)
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ n=3 Tax=Enterobacteriaceae RepID=Q0TLX4_ECOL5
dnaJ; chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_072_243G1_scaffold_861_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13749..15665)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=1260 Tax=Enterobacteriaceae RepID=DNAK_ECO24
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
dnaK; chaperone protein dnaK
L3_072_243G1_scaffold_861_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16037..16441
DNA (405bp) protein (135aa)
UPF0412 protein YaaI n=98 Tax=Escherichia coli RepID=YAAI_ECOL5
hypothetical protein
UPF0412 protein YaaI {ECO:0000256|HAMAP-Rule:MF_01372}; Flags: Precursor;; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_072_243G1_scaffold_861_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16467..17180
DNA (714bp) protein (238aa)
UPF0174 protein yaaW n=239 Tax=Escherichia RepID=E2QEA0_ECOLX
yaaW; hypothetical protein
Ubiquinol-cytochrome C chaperone family protein {ECO:0000313|EMBL:KEJ53291.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_072_243G1_scaffold_861_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17329..17883
DNA (555bp) protein (185aa)
Inner membrane protein yaaH n=343 Tax=Escherichia RepID=E2QE99_ECOLX
yaaH; hypothetical protein
Inner membrane protein yaaH {ECO:0000313|EMBL:KEJ53290.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Displaying 17 items

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