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L3_072_362G1_scaffold_1251

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_1251_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Alanine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSA1_BIFLS
alanyl tRNA synthetase suspected. See adjacent gene [L3_072_362G1_scaffold_1251_2].
Alanyl-tRNA synthetase
L3_072_362G1_scaffold_1251_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(407..1165)
DNA (759bp) protein (253aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Alanine--tRNA ligase n=2 Tax=Bifidobacterium breve RepID=F9XZK4_BIFBU
alaS; Alanyl-tRNA synthetase
L3_072_362G1_scaffold_1251_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1294..1530)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSA2_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEF15189.1}; Flags: Precursor;; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_072_362G1_scaffold_1251_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1530..1928)
DNA (399bp) protein (133aa)
Secreted protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSA3_BIFLS
hypothetical protein
Secreted protein {ECO:0000313|EMBL:ACJ52683.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2011..2595)
DNA (585bp) protein (195aa)
Phosphoglycerate mutase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSA4_BIFLS
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACJ52684.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2852..3145
DNA (294bp) protein (98aa)
RelB antitoxin n=6 Tax=Bifidobacterium RepID=B7GSA5_BIFLS
relB; Hypothetical protein
RelB antitoxin {ECO:0000313|EMBL:ACJ52685.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3132..3488
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAJ1_BIFBR
Hypothetical protein
Growth inhibitor PemK {ECO:0000313|EMBL:KEY31976.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_1251_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3665..4267)
DNA (603bp) protein (201aa)
Transglutaminase domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSA7_BIFLS
hypothetical protein
Transglutaminase domain protein {ECO:0000313|EMBL:ACJ52687.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4372..4728)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B7GSA8_BIFLS
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87511.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_072_362G1_scaffold_1251_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4821..5261
DNA (441bp) protein (147aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Bifidobacterium RepID=B7GSA9_BIFLS
Cytidine deaminase {ECO:0000313|EMBL:ACJ52689.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5444..6226
DNA (783bp) protein (261aa)
Peptidase C26 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB0_BIFLS
putative peptidase
Peptidase C26 {ECO:0000313|EMBL:ACJ52690.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6405..7031)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=20 Tax=Bifidobacterium RepID=RS4_BIFLD
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_072_362G1_scaffold_1251_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7230..8222)
DNA (993bp) protein (331aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB2_BIFLS
putative ABC transporter ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACJ52692.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8224..9441)
DNA (1218bp) protein (406aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB3_BIFLS
hypothetical protein
Macrolide transporter ATP-binding /permease protein {ECO:0000313|EMBL:CEE99360.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_072_362G1_scaffold_1251_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9532..9930)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B7GSB4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31970.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_1251_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10075..12798)
DNA (2724bp) protein (908aa)
ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB5_BIFLS
ATP-dependent DNA helicase PcrA
UvrD/REP helicase {ECO:0000313|EMBL:ACJ52695.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_1251_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12885..13466
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01184}; Short=XPRTase {ECO:0000255|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000255|HAMAP-Rule:MF_01184};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Xanthine phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=XPT_BIFLS
xanthine phosphoribosyltransferase
L3_072_362G1_scaffold_1251_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13517..14881
DNA (1365bp) protein (455aa)
Xanthine/uracil transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB7_BIFLS
xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ACJ52697.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying 18 items

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