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L3_072_362G1_scaffold_1424

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_1424_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(81..1055)
DNA (975bp) protein (325aa)
Integrase core domain protein (Fragment) n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUB4_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EEG93815.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
insK; transposase InsK
L3_072_362G1_scaffold_1424_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1055..1456)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93816.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_072_362G1_scaffold_1424_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1819..2058
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C7GEJ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99759.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_362G1_scaffold_1424_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2135..4348)
DNA (2214bp) protein (738aa)
ABC-type transport system, involved in lipoprotein release, permease component n=3 Tax=Clostridiales RepID=D4LZQ9_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEU99758.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_362G1_scaffold_1424_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4338..5105)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Clostridiales RepID=D4LZR0_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL27270.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_362G1_scaffold_1424_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5217..6230)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Signal transduction histidine kinase n=2 Tax=Clostridiales RepID=D4LZR1_9FIRM
Signal transduction histidine kinase
L3_072_362G1_scaffold_1424_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6227..6895)
DNA (669bp) protein (223aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=Clostridiales RepID=D4LZR2_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU99755.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_362G1_scaffold_1424_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7004..7750)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99754.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_072_362G1_scaffold_1424_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7689..9410)
DNA (1722bp) protein (574aa)
Plasmid mobilization system relaxase n=3 Tax=Clostridiales RepID=D4JMU9_9FIRM
Plasmid mobilization system relaxase {ECO:0000313|EMBL:CBK92303.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
plasmid mobilization system relaxase
L3_072_362G1_scaffold_1424_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9367..9738)
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=T5LWH4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27274.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_362G1_scaffold_1424_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9738..10052)
DNA (315bp) protein (105aa)
Relaxasome subunit MobC n=5 Tax=Clostridiales RepID=D4JMV1_9FIRM
relaxasome subunit MobC
Relaxasome subunit MobC {ECO:0000313|EMBL:CBL27275.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_362G1_scaffold_1424_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10193..10423)
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=24 Tax=root RepID=D4JMV2_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK89672.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_072_362G1_scaffold_1424_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10595..11224
DNA (630bp) protein (210aa)
Helix-turn-helix n=3 Tax=Lachnospiraceae RepID=D4LZR7_9FIRM
Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU98559.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_362G1_scaffold_1424_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11311..12606
DNA (1296bp) protein (432aa)
Site-specific recombinase XerD n=3 Tax=Clostridiales RepID=D4LZR8_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL27278.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying 14 items

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