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L3_072_362G1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 212 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_8_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..1076
DNA (1074bp) protein (358aa)
Chaperone protein DnaK n=7 Tax=Bifidobacterium bifidum RepID=E3ERE0_BIFBS
dnaK; chaperone protein dnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_362G1_scaffold_8_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1079..1783
DNA (705bp) protein (235aa)
Protein GrpE n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0G2_BIFBP
grpE; molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_362G1_scaffold_8_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2244..3251
DNA (1008bp) protein (336aa)
DnaJ domain protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAZ8_BIFBI
dnaJ1; chaperone protein dnaJ
Chaperone protein dnaJ {ECO:0000313|EMBL:EKF15027.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_362G1_scaffold_8_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3345..3857
DNA (513bp) protein (171aa)
Heat shock regulatory protein hspR n=5 Tax=Bifidobacterium RepID=E3ERD6_BIFBS
hspR; putative heat shock protein
Putative heat shock protein {ECO:0000313|EMBL:AFL05383.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_362G1_scaffold_8_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4213..6717
DNA (2505bp) protein (835aa)
exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase n=2 Tax=Bifidobacterium bifidum RepID=K2HTI4_BIFBI
Exo-alpha-sialidase {ECO:0000313|EMBL:EKE49842.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_362G1_scaffold_8_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7029..12377
DNA (5349bp) protein (1783aa)
exo-alpha-sialidase (EC:3.2.1.18)
BNR/Asp-box repeat protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DSR5_BIFBI
Glycosyl hydrolase {ECO:0000313|EMBL:BAQ98986.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_362G1_scaffold_8_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12693..13409
DNA (717bp) protein (239aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=K2I836_BIFBI
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI82780.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98985.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_362G1_scaffold_8_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13904..14602)
DNA (699bp) protein (233aa)
DedA integral membrane protein n=2 Tax=Bifidobacterium RepID=K2MC78_BIFBI
hypothetical protein
DedA integral membrane protein {ECO:0000313|EMBL:EKF14892.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_362G1_scaffold_8_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14872..15858
DNA (987bp) protein (329aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Tetrapyrrole (Corrin/Porphyrin) methylase family protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQQ1_BIFBS
Tetrapyrrole (Corrin/Porphyrin) methylase family protein
L3_072_362G1_scaffold_8_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15860..16291)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=E4VB06_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44088.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_362G1_scaffold_8_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16389..17219)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WKG3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05376.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_362G1_scaffold_8_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17369..19231
DNA (1863bp) protein (621aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Methionine--tRNA ligase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0F2_BIFBP
L3_072_362G1_scaffold_8_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19426..19932
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQM3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51080.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_072_362G1_scaffold_8_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20696..20845)
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=E4VB11_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22237.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_362G1_scaffold_8_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20983..21516
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G9W9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22238.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L3_072_362G1_scaffold_8_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21471..22604
DNA (1134bp) protein (378aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DSQ6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI44084.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_072_362G1_scaffold_8_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22780..23739
DNA (960bp) protein (320aa)
Hydrolase, TatD family n=3 Tax=Bifidobacterium bifidum RepID=E4VB14_BIFBI
Hydrolase, TatD family {ECO:0000313|EMBL:EFR50779.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
tadD; sec-independent protein
L3_072_362G1_scaffold_8_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23903..26365
DNA (2463bp) protein (821aa)
Probable potassium transport system protein kup n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LDU6_BIFBI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
K+ transporter
L3_072_362G1_scaffold_8_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27583..28449
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E3EQP1_BIFBS
putative glutamine amido transferase
Putative glutamine amido transferase {ECO:0000313|EMBL:AFL05367.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_362G1_scaffold_8_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28653..29399
DNA (747bp) protein (249aa)
Phosphohydrolase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0E6_BIFBP
phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFL05366.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_362G1_scaffold_8_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29477..30796)
DNA (1320bp) protein (440aa)
sugar ABC transporter (EC:3.6.3.17)
ABC-type sugar transport system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0E5_BIFBP
Sugar ABC transporter {ECO:0000313|EMBL:EKF15975.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_362G1_scaffold_8_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30793..32226)
DNA (1434bp) protein (478aa)
SalY-type ABC antimicrobial peptide transportsystem permease component n=2 Tax=Bifidobacterium bifidum RepID=K2I864_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI44078.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
SalY-type ABC antimicrobial peptide transportsystem permease component
L3_072_362G1_scaffold_8_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32707..34863
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQN3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51090.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
methyl-accepting chemotaxis protein
L3_072_362G1_scaffold_8_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35452..37131
DNA (1680bp) protein (560aa)
Riboflavin-specific deaminase n=4 Tax=Bifidobacterium RepID=K2MFF4_BIFBI
Putative riboflavin-specific deaminase {ECO:0000313|EMBL:CDB22250.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
riboflavin-specific deaminase
L3_072_362G1_scaffold_8_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37255..38154)
DNA (900bp) protein (300aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Thiazole synthase n=2 Tax=Bifidobacterium bifidum RepID=K2M1Y5_BIFBI
thiG; thiazole biosynthesis protein
L3_072_362G1_scaffold_8_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38277..38471)
DNA (195bp) protein (65aa)
ThiS protein n=1 Tax=Bifidobacterium bifidum RepID=UPI00019771C0
thiS; ThiS protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98966.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_362G1_scaffold_8_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39065..40873
DNA (1809bp) protein (603aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQN2_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO53916.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hypothetical protein
L3_072_362G1_scaffold_8_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41019..42083
DNA (1065bp) protein (355aa)
Glycosyltransferase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0D7_BIFBP
glycosyltransferase
Glycosyltransferase (Type 2 family) {ECO:0000313|EMBL:ADO53915.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_362G1_scaffold_8_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42168..42518)
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VB29_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50794.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_072_362G1_scaffold_8_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42870..43610)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E3EQM8_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53912.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 212 in total

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