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L3_072_362G1_scaffold_40

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Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_40_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..2351)
DNA (2349bp) protein (783aa)
Cell wall binding repeat 2 family protein (Fragment) n=1 Tax=Clostridium difficile P42 RepID=T4PX99_CLODI
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQG77783.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hemagglutinin/adhesin
L3_072_362G1_scaffold_40_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3111..3299)
DNA (189bp) protein (63aa)
Uncharacterized protein n=56 Tax=Clostridium difficile RepID=Q188W1_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ33593.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_40_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3325..4461)
DNA (1137bp) protein (379aa)
Fic/DOC family protein n=2 Tax=Clostridium difficile RepID=T3EPN9_CLODI
Fic/DOC family protein {ECO:0000313|EMBL:EQE69585.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
regulatory protein
L3_072_362G1_scaffold_40_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5001..5840)
DNA (840bp) protein (280aa)
PTS system, IId component n=121 Tax=Clostridium difficile RepID=C9XKF3_CLODC
PTS system transporter subunit IID
PTS system, IId component {ECO:0000313|EMBL:CBE02225.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_362G1_scaffold_40_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5864..6622)
DNA (759bp) protein (253aa)
PTS system sorbose-specific iic component family protein n=137 Tax=Clostridium difficile RepID=T3IE33_CLODC
PTS system mannose/fructose/sorbose transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQG77729.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_40_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6669..7142)
DNA (474bp) protein (158aa)
PTS system, mannose/fructose/sorbose IIBcomponent (EC:2.7.1.69)
PTS system transporter subunit IIB {ECO:0000313|EMBL:CKH69427.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CKH69427.1};; PTS system, mannose/fructose/sorbose IIBcomponent {ECO:0000313|EMBL:CEJ97018.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CEJ97018.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS system sorbose subIIB component family protein n=102 Tax=Clostridium difficile RepID=T3IFQ2_CLODC
L3_072_362G1_scaffold_40_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7171..7578)
DNA (408bp) protein (136aa)
PTS system fructose IIA component family protein n=151 Tax=Clostridium difficile RepID=T3IJ10_CLODC
PTS system, mannose/fructose/sorbose IIAcomponent
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQG77842.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_40_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7634..8686)
DNA (1053bp) protein (351aa)
Putative sugar-phosphate dehydrogenase {ECO:0000313|EMBL:CCL24245.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCL24245.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
sugar-phosphate dehydrogenase (EC:1.1.1.-)
Zinc-binding dehydrogenase family protein n=1 Tax=Clostridium difficile P30 RepID=T4ZDM5_CLODI
L3_072_362G1_scaffold_40_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9082..9762
DNA (681bp) protein (227aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Clostridium difficile RepID=T4PZR8_CLODI
phosphoribosylaminoimidazole-succinocarboxamide synthase
Phosphoribosylaminoimidazolesuccinocarboxamide synthase {ECO:0000313|EMBL:EHJ33586.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_40_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9895..10215)
DNA (321bp) protein (107aa)
Quaternary ammonium compound-resistance protein n=204 Tax=Clostridium difficile RepID=C9XKE7_CLODC
quaternary ammonium compound-resistance protein
Putative small multidrug resistance SugE-like protein {ECO:0000313|EMBL:CCL32158.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_362G1_scaffold_40_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10597..11424
DNA (828bp) protein (276aa)
Omega-amidase NIT2 {ECO:0000313|EMBL:CDS83711.1}; EC=3.5.1.3 {ECO:0000313|EMBL:CDS83711.1};; Putative carbon-nitrogen hydrolase {ECO:0000313|EMBL:CDS83617.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Hydrolase, carbon-nitrogen family n=132 Tax=Clostridium difficile RepID=G6B452_CLODI
carbon-nitrogen hydrolase
L3_072_362G1_scaffold_40_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12245..12919
DNA (675bp) protein (225aa)
Transcriptional regulatory family protein n=98 Tax=Clostridium difficile RepID=T2UGN2_CLODI
Two-component response regulator {ECO:0000313|EMBL:CCL24241.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
two-component response regulator
L3_072_362G1_scaffold_40_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12907..14067
DNA (1161bp) protein (387aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
HAMP domain protein n=2 Tax=Clostridium difficile RepID=T4ZLG7_CLODI
two-component sensor histidine kinase
L3_072_362G1_scaffold_40_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14337..14810
DNA (474bp) protein (158aa)
Uncharacterized protein n=69 Tax=Clostridium difficile RepID=C9XKE3_CLODC
hypothetical protein
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EQG77762.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_40_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15096..15764
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL24238.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL24238.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter family protein n=97 Tax=Clostridium difficile RepID=T3ICY0_CLODC
L3_072_362G1_scaffold_40_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15767..18235
DNA (2469bp) protein (823aa)
ABC transporter permease {ECO:0000313|EMBL:CKH69707.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH69707.1};; ABC-type transport system, permease {ECO:0000313|EMBL:CEJ97009.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
FtsX-like permease family protein n=2 Tax=Clostridium difficile RepID=T4PZL1_CLODI
ABC-type transport system, permease
L3_072_362G1_scaffold_40_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18475..19899)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
spaK; Two-component sensor histidine kinase (EC:2.7.3.-)
HAMP domain protein n=2 Tax=Clostridium difficile RepID=T4PZC8_CLODI
L3_072_362G1_scaffold_40_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19918..20568)
DNA (651bp) protein (217aa)
Response regulator n=167 Tax=Clostridium difficile RepID=T3IJ59_CLODC
lantibiotic resistance two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL32102.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_362G1_scaffold_40_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20662..21441)
DNA (780bp) protein (260aa)
Lantibiotic protection ABC transporter permease subunit, MutG family protein n=47 Tax=Clostridium difficile RepID=T3II32_CLODC
spaG; ABC-type transportsystem,lantibiotic/multidrug-family permease
Lantibiotic protection ABC transporter permease subunit, MutG family protein {ECO:0000313|EMBL:EQG78029.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_40_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21438..22208)
DNA (771bp) protein (257aa)
Lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein n=5 Tax=Clostridium difficile RepID=T4Q0K2_CLODI
ABC-type transport system,lantibiotic/multidrug-family permease {ECO:0000313|EMBL:CCL24218.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
lantibiotic ABC transporter permease
L3_072_362G1_scaffold_40_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22205..22909)
DNA (705bp) protein (235aa)
Lantibiotic protection ABC transporter, ATP-binding subunit n=149 Tax=Clostridium difficile RepID=T3IE94_CLODC
spaF; ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein
Lantibiotic protection ABC transporter, ATP-binding subunit {ECO:0000313|EMBL:EQG77889.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_40_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23164..23676)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PZB6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS83593.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_072_362G1_scaffold_40_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24002..24259
DNA (258bp) protein (86aa)
Uncharacterized protein n=119 Tax=Clostridium difficile RepID=G6BR64_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24215.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L3_072_362G1_scaffold_40_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24402..25028
DNA (627bp) protein (209aa)
Uracil DNA glycosylase superfamily protein n=7 Tax=Clostridium difficile RepID=T4PZP3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24214.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_072_362G1_scaffold_40_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25275..26054)
DNA (780bp) protein (260aa)
4Fe-4S binding domain protein n=10 Tax=Clostridium difficile RepID=T2W212_CLODI
Putative iron-sulfur protein {ECO:0000313|EMBL:CDS83684.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative iron-sulfur protein
L3_072_362G1_scaffold_40_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26122..26583)
DNA (462bp) protein (154aa)
MarR family protein n=7 Tax=Clostridium difficile RepID=T3PL24_CLODI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCL24212.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
MarR family transcriptional regulator
L3_072_362G1_scaffold_40_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26559..27236)
DNA (678bp) protein (226aa)
Iron-sulfur flavoprotein n=10 Tax=Clostridium difficile RepID=G6BGE7_CLODI
Iron-sulfur flavoprotein {ECO:0000313|EMBL:EHJ31652.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
iron-sulfur flavoprotein
L3_072_362G1_scaffold_40_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27469..27855
DNA (387bp) protein (129aa)
Penicillinase repressor n=135 Tax=Clostridium difficile RepID=C9XKC9_CLODC
blaI; penicillinase repressor
Transcriptional regulator, Penicillinase repressor {ECO:0000313|EMBL:CCL24210.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_362G1_scaffold_40_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27858..29657
DNA (1800bp) protein (600aa)
Beta-lactamase-inducing penicillin-binding protein {ECO:0000313|EMBL:CAJ67298.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CAJ67298.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
blaR; Beta-lactamase-inducing penicillin-bindingprotein (EC:3.5.2.6)
Regulatory protein BlaR1 n=36 Tax=Clostridium difficile RepID=T2VX51_CLODI
L3_072_362G1_scaffold_40_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30012..31886)
DNA (1875bp) protein (625aa)
PTS system, sucrose-specific IIABC component {ECO:0000313|EMBL:CAJ67297.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CAJ67297.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
PTS system sucrose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, sucrose-specific IIABC component n=2 Tax=Clostridium difficile RepID=T4Q0I5_CLODI
Displaying items 1-30 of 128 in total

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