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L3_072_362G1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_66_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1196..2281
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36563.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2424..3887
DNA (1464bp) protein (488aa)
Lysine decarboxylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HED2_9FIRM
Lysine decarboxylase {ECO:0000313|EMBL:CDE36562.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
lysine decarboxylase
L3_072_362G1_scaffold_66_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3866..4480
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36561.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4604..5047
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36560.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5089..6081
DNA (993bp) protein (331aa)
DNA polymerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA46_9FIRM
DNA polymerase {ECO:0000313|EMBL:CDE36559.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA polymerase
L3_072_362G1_scaffold_66_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6160..7074
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36558.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7064..7789
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36557.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7821..8666
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB58_9FIRM
hypothetical protein
L3_072_362G1_scaffold_66_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8743..9576
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
nfo; putative endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAY8_9FIRM
L3_072_362G1_scaffold_66_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9657..10298)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36920.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10509..12641
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36919.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12710..15286
DNA (2577bp) protein (859aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HD77_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE36918.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
X-X-X-Leu-X-X-Gly heptad repeats
L3_072_362G1_scaffold_66_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15426..16058
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35288.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Region found in RelA / SpoT proteins.
L3_072_362G1_scaffold_66_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16027..16251
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35287.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16264..16725
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35286.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
conserved exported protein of unknown function
L3_072_362G1_scaffold_66_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16764..17246
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35285.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17276..17722)
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6L5_9FIRM
MarR family transcriptional regulator {ECO:0000313|EMBL:CDE35284.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MarR family transcriptional regulator
L3_072_362G1_scaffold_66_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17823..17951
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35283.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_362G1_scaffold_66_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18054..19067
DNA (1014bp) protein (338aa)
2-dehydro-3-deoxygluconokinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ9_9FIRM
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:CDE35282.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
2-dehydro-3-deoxygluconokinase
L3_072_362G1_scaffold_66_20
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19216..20757
DNA (1542bp) protein (514aa)
Transcriptional regulator LuxR family n=1 Tax=Clostridium sp. CAG:127 RepID=R5NYV6_9CLOT
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CCZ07289.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_072_362G1_scaffold_66_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20795..21721
DNA (927bp) protein (309aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6L2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE35279.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22182..25394
DNA (3213bp) protein (1071aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Isoleucine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8J7_9FIRM
ileS; isoleucyl-tRNA synthetase
L3_072_362G1_scaffold_66_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25499..27541
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35277.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_362G1_scaffold_66_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27670..30138
DNA (2469bp) protein (823aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Phosphorylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N0_9FIRM
starch phosphorylase
L3_072_362G1_scaffold_66_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30306..31274
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35275.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
SpoIID/LytB domain
L3_072_362G1_scaffold_66_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31362..32198
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35274.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_66_27
unknown

Not on your lists

32655..34169
DNA (1515bp) protein (505aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBL39565.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL39565.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=3 Tax=Clostridiales RepID=D4MVZ9_9FIRM
L3_072_362G1_scaffold_66_28
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34192..36054
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AP61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89456.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_072_362G1_scaffold_66_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36123..38132
DNA (2010bp) protein (670aa)
Membrane carboxypeptidase (penicillin-binding protein) (EC:2.4.1.- 3.4.-.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AP60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89455.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_072_362G1_scaffold_66_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38262..40967
DNA (2706bp) protein (902aa)
Polysaccharide Lyase Family 1-like pectate lyase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA41_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CDE35372.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
Displaying items 1-30 of 129 in total

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