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L3_072_362G1_scaffold_67

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Displaying items 1-30 of 116 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_67_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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233..949
DNA (717bp) protein (239aa)
Transcriptional regulatory protein YycF n=51 Tax=Lactobacillus casei group RepID=K0N8E4_LACCA
Two-component response regulator SA14-24
Two-component response regulator {ECO:0000313|EMBL:EKP96528.1}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
L3_072_362G1_scaffold_67_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

965..2875
DNA (1911bp) protein (637aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Signal transduction histidine kinase n=34 Tax=Lactobacillus casei group RepID=D8GEB2_LACCZ
two-component sensor kinase
L3_072_362G1_scaffold_67_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2865..4292
DNA (1428bp) protein (476aa)
Uncharacterized protein n=5 Tax=Lactobacillus casei group RepID=S2PHI4_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC92574.1}; TaxID=1256211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4649.;"
YycH protein
L3_072_362G1_scaffold_67_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4347..5144
DNA (798bp) protein (266aa)
Uncharacterized protein n=34 Tax=Lactobacillus casei group RepID=C5F7G5_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87978.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_67_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5214..6032
DNA (819bp) protein (273aa)
Zn-dependent hydrolase, beta-lactamase superfamily n=52 Tax=Lactobacillus casei group RepID=B3WBJ0_LACCB
Zn-dependent hydrolase YycJ/WalJ, required for cell wall metabolism and coordination of cell division with DNA replication
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EPC87977.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_67_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6541..7869
DNA (1329bp) protein (443aa)
htrA; serine protease Do-like HtrA (EC:3.4.21.107)
Serine protease {ECO:0000313|EMBL:EKQ06633.1}; EC=3.4.21.- {ECO:0000313|EMBL:EKQ06633.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Periplasmic trypsin-like serine protease, HtrA/DegQ family n=42 Tax=Lactobacillus casei group RepID=B3WBI9_LACCB
L3_072_362G1_scaffold_67_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8481..8885
DNA (405bp) protein (135aa)
Uncharacterized protein n=50 Tax=Lactobacillus casei group RepID=C5F7F8_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERN49518.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_362G1_scaffold_67_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9045..9482
DNA (438bp) protein (146aa)
Molecular chaperone n=33 Tax=Lactobacillus casei group RepID=C5F7F7_LACPA
Molecular chaperone, small heat shock protein
Small heat shock protein {ECO:0000313|EMBL:EKP98495.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_362G1_scaffold_67_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9849..11696
DNA (1848bp) protein (616aa)
Cation transport ATPase n=12 Tax=Lactobacillus casei group RepID=S6C803_LACPA
Cation transport ATPase {ECO:0000313|EMBL:EPC29088.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
cobalt ABC transporter ATP-binding protein
L3_072_362G1_scaffold_67_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11857..13029)
DNA (1173bp) protein (391aa)
FliK family flagellar hook-length control protein n=1 Tax=Lactobacillus casei UCD174 RepID=K6RU83_LACCA
FliK family flagellar hook-length control protein {ECO:0000313|EMBL:EKQ16499.1}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
hypothetical protein
L3_072_362G1_scaffold_67_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13267..13395
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei W56 RepID=K0N8D5_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK23888.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L3_072_362G1_scaffold_67_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13818..15428
DNA (1611bp) protein (537aa)
ABC-type oligopeptide transport system, periplasmic component n=2 Tax=Lactobacillus casei RepID=Q033W1_LACC3
oligopeptide ABC transporter periplasmic protein
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:ABJ71511.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L3_072_362G1_scaffold_67_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15453..16796
DNA (1344bp) protein (448aa)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase n=8 Tax=Lactobacillus casei group RepID=Q033W2_LACC3
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein {ECO:0000313|EMBL:EPC87969.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_67_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16920..17750)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=Q033W3_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD08985.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_072_362G1_scaffold_67_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18126..19226)
DNA (1101bp) protein (367aa)
Di-I and tricarboxylate transporter n=26 Tax=Lactobacillus casei group RepID=C5F7F1_LACPA
cation transporter
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EPC51555.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_362G1_scaffold_67_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19600..20079
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Ribosomal RNA large subunit methyltransferase H n=37 Tax=Lactobacillus casei group RepID=RLMH_LACC3
hypothetical protein
L3_072_362G1_scaffold_67_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20087..20638
DNA (552bp) protein (184aa)
Uncharacterized protein n=4 Tax=Lactobacillus casei group RepID=D8GE96_LACCZ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP69716.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_072_362G1_scaffold_67_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20744..21205
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=3 Tax=Lactobacillus paracasei RepID=S2LEZ4_LACPA
Putative N-acetyltransferase YafP {ECO:0000313|EMBL:EPC50526.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
acetyltransferase
L3_072_362G1_scaffold_67_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21292..21747
DNA (456bp) protein (152aa)
Acetyltransferase, GNAT family n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2N9Y5_LACPA
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EPC37594.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
acetyltransferase
L3_072_362G1_scaffold_67_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21807..22109
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2P2U9_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC37593.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
hypothetical protein
L3_072_362G1_scaffold_67_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22132..22449
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp17 RepID=S2M8W8_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC37593.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Hypothetical protein
L3_072_362G1_scaffold_67_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22538..23575)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Lactobacillus casei group RepID=S2N9Y0_LACPA
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EPC87961.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
nucleoside-diphosphate-sugar epimerase
L3_072_362G1_scaffold_67_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23672..24115
DNA (444bp) protein (148aa)
Transcription regulator n=7 Tax=Lactobacillus casei group RepID=K6QVZ7_LACCA
MerR family transcriptional regulator {ECO:0000313|EMBL:EPC87960.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
transcription regulator
L3_072_362G1_scaffold_67_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24228..24749
DNA (522bp) protein (174aa)
Acetyltransferase, GNAT family n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp17 RepID=S2M765_LACPA
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EPC87959.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Histone deacetylase superfamily
L3_072_362G1_scaffold_67_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24746..25501
DNA (756bp) protein (252aa)
Protein-tyrosine phosphatase n=3 Tax=Lactobacillus casei group RepID=C5F7E5_LACPA
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:EKP98711.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_362G1_scaffold_67_26
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25484..26521)
DNA (1038bp) protein (346aa)
NADPH:quinone reductase related Zn-dependent oxidoreductase n=4 Tax=Lactobacillus casei group RepID=D8GE91_LACCZ
NADPH:quinone reductase-like Zn-dependent oxidoreductase
Bifunctional protein: zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:AGP69711.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_072_362G1_scaffold_67_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26753..27274
DNA (522bp) protein (174aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
D,D-heptose 1,7-bisphosphate phosphatase n=17 Tax=Lactobacillus casei group RepID=K6QE90_LACCA
Lipopolysaccharide heptosyltransferase II and D, D-heptose 1,7-bisphosphate phosphatase (Modular protein)
L3_072_362G1_scaffold_67_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27285..27785
DNA (501bp) protein (167aa)
GNAT family acetyltransferase n=3 Tax=Lactobacillus casei group RepID=K6QVZ2_LACCA
GNAT family acetyltransferase {ECO:0000313|EMBL:EPC87955.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
GNAT family acetyltransferase
L3_072_362G1_scaffold_67_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27822..28553
DNA (732bp) protein (244aa)
Uncharacterized protein n=12 Tax=Lactobacillus casei group RepID=K0NB70_LACCA
aac; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK23875.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L3_072_362G1_scaffold_67_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29079..29399
DNA (321bp) protein (107aa)
Membrane transporter of cations and cationic drugs n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q033X6_LACC3
membrane transporter
Membrane transporter {ECO:0000313|EMBL:GAN36258.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Displaying items 1-30 of 116 in total

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