ggKbase home page

L3_072_362G1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_73_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..372
DNA (372bp) protein (124aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9H9_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDE35603.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

470..1186
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Pseudouridine synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N1_9FIRM
ribosomal large subunit pseudouridine synthase F
L3_072_362G1_scaffold_73_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1170..3149
DNA (1980bp) protein (660aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Q6_9FIRM
L3_072_362G1_scaffold_73_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3243..4151
DNA (909bp) protein (303aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Homoserine O-succinyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBU6_9FIRM
homoserine O-succinyltransferase
L3_072_362G1_scaffold_73_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4172..4657
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35676.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4680..5375
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35675.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5424..6407)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35674.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_362G1_scaffold_73_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6526..7785)
DNA (1260bp) protein (420aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA polymerase IV n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Q1_9FIRM
DNA-directed DNA polymerase
L3_072_362G1_scaffold_73_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8057..8368
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35672.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8419..9873)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35671.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
polysaccharide biosynthesis protein
L3_072_362G1_scaffold_73_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..11169
DNA (1155bp) protein (385aa)
Cysteine desulfurase NifS n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8F9_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDE35670.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
cysteine desulfurase NifS
L3_072_362G1_scaffold_73_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11177..11998)
DNA (822bp) protein (274aa)
Histidinol-phosphatase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7L8_9FIRM
Histidinol-phosphatase {ECO:0000313|EMBL:CDE35669.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
histidinol-phosphatase
L3_072_362G1_scaffold_73_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12199..13893
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35668.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Na/Pi-cotransporter II-like protein
L3_072_362G1_scaffold_73_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14060..15088
DNA (1029bp) protein (343aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBT4_9FIRM
glyceraldehyde 3-phosphate dehydrogenase
L3_072_362G1_scaffold_73_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15312..16505
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Phosphoglycerate kinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8N5_9FIRM
pgk; phosphoglycerate kinase
L3_072_362G1_scaffold_73_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16784..17530
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Triosephosphate isomerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8F4_9FIRM
tpiA; triosephosphate isomerase
L3_072_362G1_scaffold_73_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17704..19251
DNA (1548bp) protein (516aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7L3_9FIRM
L3_072_362G1_scaffold_73_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19356..19613
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35663.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19699..21681
DNA (1983bp) protein (661aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBS7_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDE35662.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Methyl-accepting chemotaxis protein
L3_072_362G1_scaffold_73_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21722..22702
DNA (981bp) protein (327aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8N2_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE35661.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type sugar transport system, periplasmic component
L3_072_362G1_scaffold_73_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22735..24912
DNA (2178bp) protein (726aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribonuclease R n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8E9_9FIRM
exoribonuclease II
L3_072_362G1_scaffold_73_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24872..25345
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7K7_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
SsrA-binding protein
L3_072_362G1_scaffold_73_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26363..26953
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35658.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27029..27703
DNA (675bp) protein (225aa)
Two-component system OmpR family response regulator ResD n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBS3_9FIRM
Two-component system OmpR family response regulator ResD {ECO:0000313|EMBL:CDE35657.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system OmpR family response regulator ResD
L3_072_362G1_scaffold_73_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27750..29429
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8M9_9FIRM
hypothetical protein
L3_072_362G1_scaffold_73_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29492..30292
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35655.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30428..31366)
DNA (939bp) protein (313aa)
Carbohydrate Esterase Family 8-like pectin methylesterase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7K3_9FIRM
Carbohydrate Esterase Family 8-like pectin methylesterase {ECO:0000313|EMBL:CDE35654.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
carbohydrate esterase family 8-like pectin methylesterase
L3_072_362G1_scaffold_73_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31559..31987
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35653.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31984..33126
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35652.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_362G1_scaffold_73_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33282..33842
DNA (561bp) protein (187aa)
Putative biotin biosynthesis protein BioY n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8M5_9FIRM
Putative biotin biosynthesis protein BioY {ECO:0000313|EMBL:CDE35651.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
biotin biosynthesis protein BioY
Displaying items 1-30 of 105 in total

View Taxonomy