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L3_072_362G1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_75_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(83..484)
DNA (402bp) protein (134aa)
Chromate transporter family protein n=2 Tax=Clostridium difficile RepID=T4Q1N4_CLODI
Chromate transport protein {ECO:0000313|EMBL:EHJ29926.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_072_362G1_scaffold_75_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

604..1479
DNA (876bp) protein (292aa)
LysR substrate binding domain protein n=8 Tax=Clostridium difficile RepID=G6B2T9_CLODI
LysR substrate binding domain protein {ECO:0000313|EMBL:EHJ29925.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_072_362G1_scaffold_75_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1627..3057)
DNA (1431bp) protein (477aa)
Calcineurin-like phosphoesterase family protein n=2 Tax=Clostridium difficile RepID=T4PVN5_CLODI
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EQE70478.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
membrane-associated nucleotidase
L3_072_362G1_scaffold_75_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3596..5131)
DNA (1536bp) protein (512aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Clostridium difficile RepID=T4Q1Q3_CLODI
L3_072_362G1_scaffold_75_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5513..5932)
DNA (420bp) protein (140aa)
Uncharacterized protein n=150 Tax=Clostridium difficile RepID=T3IPD3_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CDS97956.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_072_362G1_scaffold_75_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5962..6696)
DNA (735bp) protein (245aa)
Uncharacterized protein n=158 Tax=Clostridium difficile RepID=T3IN47_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21776.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_362G1_scaffold_75_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6780..7562)
DNA (783bp) protein (261aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5S4K8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH13882.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
hypothetical protein
L3_072_362G1_scaffold_75_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7782..9410)
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=67 Tax=Clostridium difficile RepID=CH60_CLOD6
groL; 60 kDa chaperonin (Protein Cpn60) (GroELprotein)
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_072_362G1_scaffold_75_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9443..9727)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=208 Tax=Clostridium difficile RepID=CH10_CLOD6
10 kDa chaperonin
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_75_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9918..11408)
DNA (1491bp) protein (497aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Cardiolipin synthase n=157 Tax=Clostridium difficile RepID=C9XIW6_CLODC
cls; cardiolipin synthetase
L3_072_362G1_scaffold_75_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11426..12301)
DNA (876bp) protein (292aa)
HhH-GPD superbase excision DNA repair family protein n=150 Tax=Clostridium difficile RepID=T3IN42_CLODC
putative DNA glycosylase
HhH-GPD superbase excision DNA repair family protein {ECO:0000313|EMBL:EQE70487.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_75_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12595..13626)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=38 Tax=Clostridium difficile RepID=G6BRG5_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ67012.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_75_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13814..14704
DNA (891bp) protein (297aa)
HTH-type transcriptional regulator CysL n=170 Tax=Clostridium difficile RepID=T3INA8_CLODC
Transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ67011.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_75_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14756..15682)
DNA (927bp) protein (309aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=2 Tax=Clostridium difficile RepID=T4Q1P3_CLODI
L3_072_362G1_scaffold_75_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15897..16481)
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Orotate phosphoribosyltransferase n=218 Tax=Clostridium difficile RepID=PYRE_CLOD6
pyrE; orotate phosphoribosyltransferase
L3_072_362G1_scaffold_75_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16566..17468)
DNA (903bp) protein (301aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium difficile P59 RepID=T4T3E3_CLODI
L3_072_362G1_scaffold_75_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17461..18153)
DNA (693bp) protein (231aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:CKH79346.1}; EC=1.3.5.2 {ECO:0000313|EMBL:CKH79346.1};; Dihydroorotate dehydrogenase electron transfersubunit {ECO:0000313|EMBL:CEJ96697.1}; EC=1.3.3.1 {ECO:0000313|EMBL:CEJ96697.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Dihydroorotate dehydrogenase electron transfer subunit n=102 Tax=Clostridium difficile RepID=C9XIV9_CLODC
L3_072_362G1_scaffold_75_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18192..19112)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Aspartate carbamoyltransferase n=3 Tax=Clostridium difficile RepID=T4P667_CLODI
pyrB; aspartate carbamoyltransferase catalytic chain
L3_072_362G1_scaffold_75_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19408..20430)
DNA (1023bp) protein (341aa)
NlpC/P60 family protein n=165 Tax=Clostridium difficile RepID=G6BQY6_CLODI
cell wall hydrolase
Putative cell wall hydrolase {ECO:0000313|EMBL:CAJ67005.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_75_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20829..21104)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium difficile T19 RepID=U4C4J2_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ96694.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_362G1_scaffold_75_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21346..22479)
DNA (1134bp) protein (378aa)
BlaR1 peptidase M56 family protein n=2 Tax=Clostridium difficile RepID=T4Q1L4_CLODI
putative membrane-associated metalloprotease,M56family
Membrane-associated metalloprotease {ECO:0000313|EMBL:CKH79420.1}; Peptidase, M56 family {ECO:0000313|EMBL:CDS83202.1}; Putative membrane-associated metalloprotease, M56 family {ECO:0000313|EMBL:CDS83054.1}; Putative membrane-associated metalloprotease,M56family {ECO:0000313|EMBL:CEJ96692.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_362G1_scaffold_75_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22809..23399)
DNA (591bp) protein (197aa)
BlaR1 peptidase M56 family protein n=2 Tax=Clostridium difficile RepID=T4Q1D2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS97644.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_072_362G1_scaffold_75_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23612..24877)
DNA (1266bp) protein (422aa)
NAD-specific glutamate dehydrogenase n=207 Tax=Clostridium difficile RepID=DHE2_CLODI
glutamate dehydrogenase, NAD-specific
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_75_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25006..25830)
DNA (825bp) protein (275aa)
Putative aTP-binding protein n=2 Tax=Clostridium difficile RepID=T4Q1N5_CLODI
ATP-binding protein
Putative ATPase {ECO:0000313|EMBL:CAJ67000.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_75_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26103..27290
DNA (1188bp) protein (396aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CCL21579.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CCL21579.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=23 Tax=Clostridium difficile RepID=T2X9I0_CLODI
L3_072_362G1_scaffold_75_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27429..28655)
DNA (1227bp) protein (409aa)
Oxidoreductase%2C NAD/FAD binding subunit {ECO:0000313|EMBL:CKH79630.1}; EC=1.18.1.1 {ECO:0000313|EMBL:CKH79630.1};; Putative oxidoreductase, NAD/FAD bindingsubunit {ECO:0000313|EMBL:CEJ96687.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Pyridine nucleotide-disulfide oxidoreductase family protein n=2 Tax=Clostridium difficile RepID=T4Q1K9_CLODI
oxidoreductase NAD/FAD binding subunit
L3_072_362G1_scaffold_75_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28630..29115)
DNA (486bp) protein (162aa)
Putative oxidoreductase, Fe-S subunit n=6 Tax=Clostridium difficile RepID=U3XEY1_CLODI
Oxidoreductase%2C electron transfer subunit {ECO:0000313|EMBL:CKH79663.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative oxidoreductase, Fe-S subunit
L3_072_362G1_scaffold_75_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29096..30997)
DNA (1902bp) protein (634aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EQG78560.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EQG78560.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Carbon monoxide dehydrogenase n=138 Tax=Clostridium difficile RepID=Q18CR1_CLOD6
oxidoreductase, acetyl-CoA synthase subunit
L3_072_362G1_scaffold_75_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31167..32234)
DNA (1068bp) protein (356aa)
Bacterial capsule synthesis PGA_cap family protein n=2 Tax=Clostridium difficile RepID=T4Q1N2_CLODI
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CAJ66995.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_75_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32519..32689
DNA (171bp) protein (57aa)
Ferredoxin n=1 Tax=Clostridium difficile Y401 RepID=T4I1R3_CLODI
fdxA; ferredoxin
Ferredoxin (4Fe-4S cluster-containing protein) (Fdx-like) {ECO:0000313|EMBL:CAJ66994.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Displaying items 1-30 of 101 in total

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