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L3_072_362G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_133_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1441
DNA (1440bp) protein (480aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMP6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ98338.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_362G1_scaffold_133_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1447..2481
DNA (1035bp) protein (345aa)
Haloacid dehalogenase-like hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium RepID=R6GAW2_9BIFI
Haloacid dehalogenase-like hydrolase (HAD superfamily) {ECO:0000313|EMBL:CDB22553.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
nagD; N-acetylglucosamine-6-phosphate deacetylase
L3_072_362G1_scaffold_133_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2562..2690
DNA (129bp) protein (43aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=I3WIE8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83743.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_362G1_scaffold_133_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2739..3497
DNA (759bp) protein (253aa)
Hemolysin-like protein {ECO:0000313|EMBL:KFI43169.1}; EC=2.1.1.226 {ECO:0000313|EMBL:KFI43169.1};; EC=2.1.1.227 {ECO:0000313|EMBL:KFI43169.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Hemolysin-like protein with S4 and FtsJ-like methyltransferase domains n=6 Tax=Bifidobacterium RepID=E4NXD0_BIFBP
hemolysinIII-like protein
L3_072_362G1_scaffold_133_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3533..4207)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HRB5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49968.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_072_362G1_scaffold_133_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4353..5006)
DNA (654bp) protein (218aa)
TrkA family potassium uptake protein n=7 Tax=Bifidobacterium RepID=E4NXC8_BIFBP
potassium uptake protein
TrkA family potassium uptake protein {ECO:0000313|EMBL:CDB22557.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_362G1_scaffold_133_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5187..6650)
DNA (1464bp) protein (488aa)
Cation transporter n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MC71_BIFBI
Cation transporter {ECO:0000313|EMBL:EKF14887.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
cation transporter
L3_072_362G1_scaffold_133_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6911..7885
DNA (975bp) protein (325aa)
ATP-NAD kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=6 Tax=Bifidobacterium RepID=E3ER09_BIFBS
L3_072_362G1_scaffold_133_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7878..9644
DNA (1767bp) protein (589aa)
DNA repair protein RecN n=7 Tax=Bifidobacterium RepID=E3ER08_BIFBS
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
recN; DNA repair protein RecN
L3_072_362G1_scaffold_133_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9705..10364
DNA (660bp) protein (220aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bifidobacterium bifidum RepID=E4VA68_BIFBI
Phosphatase {ECO:0000313|EMBL:EKF15533.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
yqaB; phosphatase
L3_072_362G1_scaffold_133_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10485..10859
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=7 Tax=Bifidobacterium RepID=E3ER06_BIFBS
fatty acyl-responsive regulator
Fatty acyl-responsive regulator {ECO:0000313|EMBL:AFL04653.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_362G1_scaffold_133_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10955..11914
DNA (960bp) protein (320aa)
ABC transporter ATP-binding protein (EC:3.6.3.25)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M381_BIFBI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF15535.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_362G1_scaffold_133_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11898..12638
DNA (741bp) protein (247aa)
Cation transporter ATPase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER04_BIFBS
Cation transporter ATPase
Cation transporter ATPase {ECO:0000313|EMBL:ADO53276.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_362G1_scaffold_133_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12640..13350
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXC0_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE49951.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_362G1_scaffold_133_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13384..14871)
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
ThrC Threonine synthase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXB9_BIFBP
Threonine synthase {ECO:0000313|EMBL:ADO53274.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_362G1_scaffold_133_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15067..16365
DNA (1299bp) protein (433aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VA62_BIFBI
L3_072_362G1_scaffold_133_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16362..16913
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BZV6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83729.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_362G1_scaffold_133_18
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16910..17668
DNA (759bp) protein (253aa)
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Bifidobacterium RepID=E4NXB6_BIFBP
L3_072_362G1_scaffold_133_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17803..18825
DNA (1023bp) protein (341aa)
ribose-phosphate pyrophosphokinase PrsA (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Ribose-phosphate pyrophosphokinase n=3 Tax=Bifidobacterium bifidum RepID=E4NXB5_BIFBP
L3_072_362G1_scaffold_133_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19083..20417
DNA (1335bp) protein (445aa)
Bifunctional protein GlmU n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GMV7_9BIFI
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
glmU; UDP-N-acetylglucosamine pyrophosphorylase
L3_072_362G1_scaffold_133_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20422..20859
DNA (438bp) protein (146aa)
Ribosomal silencing factor RsfS n=3 Tax=Bifidobacterium RepID=K2M3P3_BIFBI
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative Iojap protein
L3_072_362G1_scaffold_133_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20837..21574
DNA (738bp) protein (246aa)
Phosphoglycerate mutase n=2 Tax=Bifidobacterium RepID=R6GAX7_9BIFI
Phosphoglycerate mutase {ECO:0000313|EMBL:CDB22573.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
gpm4; phosphoglycerate mutase
L3_072_362G1_scaffold_133_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21711..22154
DNA (444bp) protein (148aa)
Transmembrane protein n=8 Tax=Bifidobacterium RepID=E3EQZ4_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE49960.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_362G1_scaffold_133_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22215..23477
DNA (1263bp) protein (421aa)
cyclomaltodextrinase (EC:3.2.1.135)
Cyclomaltodextrinase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXB0_BIFBP
Putative alpha-amylase {ECO:0000313|EMBL:BAQ98315.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_362G1_scaffold_133_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24161..25387)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HTW0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49962.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_072_362G1_scaffold_133_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25524..26219)
DNA (696bp) protein (232aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=E4VA52_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83719.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_362G1_scaffold_133_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26453..27364
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI54_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI43146.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_072_362G1_scaffold_133_28
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27492..27896
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=4 Tax=Bifidobacterium RepID=E3EQY9_BIFBS
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase pdxH {ECO:0000313|EMBL:CDB22595.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_362G1_scaffold_133_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28075..28896)
DNA (822bp) protein (274aa)
Transcriptional regulator, winged helix family protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQY8_BIFBS
transcriptional regulator
Transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:ADO53260.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_362G1_scaffold_133_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29190..30209
DNA (1020bp) protein (340aa)
VanZ family protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H8P1_9BIFI
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:CDB22597.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying items 1-30 of 84 in total

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