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L3_072_362G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_142_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

480..1034
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Peptide deformylase n=50 Tax=Lactobacillus casei group RepID=DEF_LACC3
Peptide deformylase
L3_072_362G1_scaffold_142_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1098..1391)
DNA (294bp) protein (98aa)
Uncharacterized protein n=20 Tax=Lactobacillus casei group RepID=C5F2R5_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERN49830.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_362G1_scaffold_142_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1422..1871)
DNA (450bp) protein (150aa)
Uncharacterized protein n=42 Tax=Lactobacillus casei group RepID=C5F2R6_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87212.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_142_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2491..2703
DNA (213bp) protein (71aa)
UPF0356 protein LSEI_1299 n=55 Tax=Lactobacillus casei group RepID=Y1299_LACC3
Protein of unknown function DUF1447
UPF0356 protein LC0644_1380 {ECO:0000256|HAMAP-Rule:MF_01553}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_142_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2708..4390
DNA (1683bp) protein (561aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-)
mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme n=42 Tax=Lactobacillus casei group RepID=B3WE09_LACCB
mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme {ECO:0000313|EMBL:EPC15827.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L3_072_362G1_scaffold_142_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4680..5630
DNA (951bp) protein (317aa)
Diacylglycerol kinase n=24 Tax=Lactobacillus casei group RepID=S6BR30_LACPA
DeoR family transcriptional regulator
Diacylglycerol kinase family protein {ECO:0000313|EMBL:EPC51461.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_362G1_scaffold_142_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5704..6921)
DNA (1218bp) protein (406aa)
GCN5-related N-acetyltransferase n=28 Tax=Lactobacillus casei group RepID=B3WE07_LACCB
hypothetical protein
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EPC39316.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L3_072_362G1_scaffold_142_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6928..9396)
DNA (2469bp) protein (823aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
RecD-like DNA helicase YrrC n=4 Tax=Lactobacillus casei RepID=S4ZSV1_LACCA
RecD-like DNA helicase YrrC
L3_072_362G1_scaffold_142_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9383..10051)
DNA (669bp) protein (223aa)
TPR repeats containing protein n=32 Tax=Lactobacillus casei group RepID=B3WE05_LACCB
Hypothetical protein
TPR repeats containing protein {ECO:0000313|EMBL:EPC51463.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_362G1_scaffold_142_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10089..10751)
DNA (663bp) protein (221aa)
Phosphoglycerate mutase n=40 Tax=Lactobacillus casei group RepID=C5F2S3_LACPA
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:EPC87219.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_142_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11056..12309)
DNA (1254bp) protein (418aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Lactobacillus casei 5b RepID=U6SES6_LACCA
thiouridylase
L3_072_362G1_scaffold_142_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12634..14916)
DNA (2283bp) protein (761aa)
Excinuclease ABC, subunit A n=10 Tax=Lactobacillus casei group RepID=B3WE02_LACCB
UvrABC system protein A {ECO:0000313|EMBL:CCK22439.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
Excinuclease ATPase subunit
L3_072_362G1_scaffold_142_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15133..15474)
DNA (342bp) protein (114aa)
Uncharacterized protein n=14 Tax=Lactobacillus casei group RepID=Q039P9_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD06747.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_072_362G1_scaffold_142_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15685..16848)
DNA (1164bp) protein (388aa)
Cysteine desulfurase n=24 Tax=Lactobacillus casei group RepID=C5F2S8_LACPA
cysteine sulfinate desulfinase/cysteine desulfurase-like protein
Cysteine sulfinate desulfinase {ECO:0000313|EMBL:BAN71517.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L3_072_362G1_scaffold_142_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16864..17574)
DNA (711bp) protein (237aa)
pfs; methylthioadenosine nucleosidase (EC:3.2.2.16)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
Methylthioadenosine nucleosidase (Nucleoside phosphorylase) n=39 Tax=Lactobacillus casei group RepID=B3WDZ9_LACCB
L3_072_362G1_scaffold_142_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17677..17937)
DNA (261bp) protein (87aa)
Small membrane protein n=28 Tax=Lactobacillus casei group RepID=B3WDZ8_LACCB
Small membrane protein
Small membrane protein {ECO:0000313|EMBL:GAN36778.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_142_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18049..18585)
DNA (537bp) protein (179aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EKQ19666.1}; EC=3.-.-.- {ECO:0000313|EMBL:EKQ19666.1};; EC=3.6.1.13 {ECO:0000313|EMBL:EKQ19666.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
ADP-ribose pyrophosphatase n=15 Tax=Lactobacillus casei group RepID=B3WDZ7_LACCB
Hydrolase, NUDIX family
L3_072_362G1_scaffold_142_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18887..19549
DNA (663bp) protein (221aa)
5-bromo-4-chloroindolyl phosphate hydrolysis protein n=14 Tax=Lactobacillus casei group RepID=Q039Q4_LACC3
5-bromo-4-chloroindolyl phosphate hydrolysis protein
5-bromo-4-chloroindolyl phosphate hydrolysis protein {ECO:0000313|EMBL:EKQ10467.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_072_362G1_scaffold_142_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19555..20757
DNA (1203bp) protein (401aa)
Tellurite resistance protein n=4 Tax=Lactobacillus casei group RepID=Q039Q5_LACC3
tellurite resistance protein TelA
Tellurite resistance protein {ECO:0000313|EMBL:EPC15396.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L3_072_362G1_scaffold_142_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20853..22289)
DNA (1437bp) protein (479aa)
Major facilitator superfamily permease n=13 Tax=Lactobacillus casei group RepID=K6Q1H7_LACCA
Major facilitator superfamily permease {ECO:0000313|EMBL:EKQ10465.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
major facilitator superfamily permease
L3_072_362G1_scaffold_142_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22465..23370
DNA (906bp) protein (302aa)
Phosphate-binding protein pstS 1 n=45 Tax=Lactobacillus casei group RepID=K0N832_LACCA
periplasmic-binding component of an ABC superfamily phosphate transporter
Phosphate binding protein {ECO:0000313|EMBL:EEI67180.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_072_362G1_scaffold_142_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23507..23728)
DNA (222bp) protein (74aa)
Cold-shock protein n=41 Tax=Lactobacillus casei group RepID=B3WDZ2_LACCB
Cold shock domain protein
Cold-shock protein {ECO:0000313|EMBL:ERN49811.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_362G1_scaffold_142_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23741..26527)
DNA (2787bp) protein (929aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Lactobacillus casei RepID=K6S2R3_LACCA
L3_072_362G1_scaffold_142_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26774..27559)
DNA (786bp) protein (262aa)
Cell division initiation protein n=5 Tax=Lactobacillus casei group RepID=C5F2T8_LACPA
cell division initiation protein DivIVA
Cell division initiation protein {ECO:0000313|EMBL:EEQ65099.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_362G1_scaffold_142_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27617..28396)
DNA (780bp) protein (260aa)
S4 domain-containing protein n=4 Tax=Lactobacillus casei group RepID=C5F2T9_LACPA
Hypothetical protein, contains S4-like RNA binding domain
Uncharacterized protein {ECO:0000313|EMBL:AGP68156.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_072_362G1_scaffold_142_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28403..28696)
DNA (294bp) protein (98aa)
Cell division membrane protein n=52 Tax=Lactobacillus casei group RepID=C5F2U0_LACPA
ylmG; hypothetical protein
Putative membrane protein ylmG {ECO:0000313|EMBL:EPC90330.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_362G1_scaffold_142_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28708..29163)
DNA (456bp) protein (152aa)
Cell division protein SepF n=42 Tax=Lactobacillus casei group RepID=SEPF_LACC3
FtsZ-interacting protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_072_362G1_scaffold_142_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29181..30440)
DNA (1260bp) protein (420aa)
Cell division protein FtsZ n=32 Tax=Lactobacillus casei group RepID=B3WDY5_LACCB
hypothetical protein
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L3_072_362G1_scaffold_142_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30465..31811)
DNA (1347bp) protein (449aa)
Cell division protein ftsA n=48 Tax=Lactobacillus casei group RepID=B3WDY4_LACCB
ftsA; cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_072_362G1_scaffold_142_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31921..32784)
DNA (864bp) protein (288aa)
Cell division protein DivIB n=11 Tax=Lactobacillus casei group RepID=B3WDY3_LACCB
Div1b protein
Cell division protein DivIB {ECO:0000256|HAMAP-Rule:MF_00912}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Displaying items 1-30 of 80 in total

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