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L3_072_362G1_scaffold_146

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Displaying items 1-30 of 104 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_146_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V3P0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19867.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
polysialic acid transport protein kpsD
L3_072_362G1_scaffold_146_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(215..499)
DNA (285bp) protein (95aa)
Transcription termination/antitermination factor NusG n=2 Tax=Bacteroides caccae RepID=A5ZI07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19868.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_362G1_scaffold_146_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(884..1828)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5U116_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71748.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
integrase
L3_072_362G1_scaffold_146_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2075..4333)
DNA (2259bp) protein (753aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Bacteroides caccae RepID=A5ZI05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19870.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-N-acetylglucosaminidase
L3_072_362G1_scaffold_146_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4620..6326)
DNA (1707bp) protein (569aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZI03_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71746.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_362G1_scaffold_146_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6328..7071)
DNA (744bp) protein (248aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=3 Tax=Bacteroides RepID=A5ZI02_9BACE
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDM20357.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_362G1_scaffold_146_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7107..8768)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7X4_9BACE
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
recombination protein RecN
L3_072_362G1_scaffold_146_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8784..10001)
DNA (1218bp) protein (406aa)
Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U113_9BACE
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:CCZ71743.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_362G1_scaffold_146_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10001..10780)
DNA (780bp) protein (260aa)
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases (EC:2.7.7.7)
Exonuclease n=3 Tax=Bacteroides RepID=A5ZHZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19941.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_362G1_scaffold_146_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10852..11916)
DNA (1065bp) protein (355aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Bacteroides RepID=A5ZHZ8_9BACE
L3_072_362G1_scaffold_146_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12071..12445
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PU75_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19943.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_362G1_scaffold_146_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12973..14541)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71739.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_362G1_scaffold_146_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14625..15383)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0H1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19945.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hydrolase
L3_072_362G1_scaffold_146_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15389..16378)
DNA (990bp) protein (330aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PTH4_9BACE
L3_072_362G1_scaffold_146_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16447..17295)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V3W6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19947.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_362G1_scaffold_146_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17295..18248)
DNA (954bp) protein (318aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=A5ZHZ2_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDM20347.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_362G1_scaffold_146_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18282..19571
DNA (1290bp) protein (430aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=3 Tax=Bacteroides RepID=I9EIK9_9BACE
L3_072_362G1_scaffold_146_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19659..20063
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZHZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71732.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_362G1_scaffold_146_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20174..20653)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Ferritin n=3 Tax=Bacteroides RepID=A5ZHY9_9BACE
ferritin
L3_072_362G1_scaffold_146_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20775..21935)
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Diaminopimelate decarboxylase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V3X0_9BACE
diaminopimelate decarboxylase
L3_072_362G1_scaffold_146_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22015..23334)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Aspartokinase n=3 Tax=Bacteroides RepID=A5ZHY7_9BACE
aspartokinase
L3_072_362G1_scaffold_146_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23348..24028)
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides caccae RepID=A5ZHY6_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM20341.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP-binding protein involved in cell division
L3_072_362G1_scaffold_146_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24013..24624)
DNA (612bp) protein (204aa)
phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0I1_9BACE
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_362G1_scaffold_146_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24726..25478)
DNA (753bp) protein (251aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Bacteroides RepID=I9PTI4_9BACE
imidazole glycerol phosphate synthase subunit HisF
L3_072_362G1_scaffold_146_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25531..26253)
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Bacteroides caccae RepID=A5ZHY2_9BACE
phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase
L3_072_362G1_scaffold_146_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26415..27005)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Bacteroides RepID=A5ZHY1_9BACE
L3_072_362G1_scaffold_146_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27005..27859)
DNA (855bp) protein (285aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Formyltetrahydrofolate deformylase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHY0_9BACE
formyltetrahydrofolate deformylase
L3_072_362G1_scaffold_146_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28583..30352)
DNA (1770bp) protein (590aa)
TonB family domain-containing protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UM62_BACVU
TonB family C-terminal domain protein {ECO:0000313|EMBL:EXZ19478.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
hypothetical protein
L3_072_362G1_scaffold_146_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30526..30777)
DNA (252bp) protein (84aa)
Outer membrane protein TonB n=1 Tax=Bacteroides faecis CAG:32 RepID=R6USC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ19480.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
outer membrane protein TonB
L3_072_362G1_scaffold_146_30
unknown

Not on your lists

30836..31060
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying items 1-30 of 104 in total

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