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L3_072_362G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_183_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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106..2028
DNA (1923bp) protein (641aa)
OPT family oligopeptide transporter n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H857_9CLOT
OPT family oligopeptide transporter {ECO:0000313|EMBL:EEH98676.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
OPT family oligopeptide transporter
L3_072_362G1_scaffold_183_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2021..2362
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVV2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13791.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_362G1_scaffold_183_3
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2805..3749
DNA (945bp) protein (315aa)
Periplasmic binding protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GM34_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:CDB15227.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
periplasmic binding protein
L3_072_362G1_scaffold_183_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3765..4814
DNA (1050bp) protein (350aa)
Iron(III) dicitrate transport ATP-binding protein fecE n=1 Tax=Clostridium sp. CAG:221 RepID=R6G1L7_9CLOT
Iron(III) dicitrate transport ATP-binding protein fecE {ECO:0000313|EMBL:CDB15226.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
transport system permease
L3_072_362G1_scaffold_183_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4816..5613
DNA (798bp) protein (266aa)
UPI0003D5FC07 related cluster n=1 Tax=unknown RepID=UPI0003D5FC07
Ferric enterobactin transport ATP-binding protein FepC {ECO:0000313|EMBL:ETI90329.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter
L3_072_362G1_scaffold_183_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5749..5904
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25427.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_072_362G1_scaffold_183_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6018..7697)
DNA (1680bp) protein (560aa)
Oligoendopeptidase, M3 family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MHE7_9CLOT
oligoendopeptidase, M3 family
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:CDM70108.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_362G1_scaffold_183_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8007..8981
DNA (975bp) protein (325aa)
Ribose ABC transporter n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB16_CLOBU
Ribose ABC transporter {ECO:0000313|EMBL:EEP56233.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rbsB; Ribose ABC transporter (ribose-binding periplasmic component)
L3_072_362G1_scaffold_183_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9012..10352
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0AKJ9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88679.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Membrane associated histidine kinase-like ATPase
L3_072_362G1_scaffold_183_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10330..11013
DNA (684bp) protein (228aa)
DNA-binding response regulator n=2 Tax=Clostridium butyricum RepID=M8JZF3_CLOBU
Fructose response regulator of fruA and EII fructose/mannose {ECO:0000313|EMBL:KJZ88723.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component response regulator
L3_072_362G1_scaffold_183_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11003..12313
DNA (1311bp) protein (437aa)
Sugar-binding periplasmic protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7I4_CLOBU
Periplasmic fructose-binding protein component of signal transduction system LevQ {ECO:0000313|EMBL:KJZ88680.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sugar-binding periplasmic protein
L3_072_362G1_scaffold_183_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12625..13386
DNA (762bp) protein (254aa)
DeoR family transcripitonal regulator n=1 Tax=Clostridium beijerinckii RepID=UPI0002F65A5C
DeoR family transcriptional regulator
DeoR family transcripitonal regulator {ECO:0000313|EMBL:ETD69535.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_072_362G1_scaffold_183_13
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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13386..14192
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HSW3_9FUSO
Cof-like hydrolase {ECO:0000313|EMBL:EFS27117.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
HAD-superfamily hydrolase, subfamily IIB
L3_072_362G1_scaffold_183_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14490..14918
DNA (429bp) protein (143aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system, fructose n=2 Tax=Clostridium butyricum RepID=M8J3U6_CLOBU
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KHD13569.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_072_362G1_scaffold_183_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14932..15426
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AKK5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32647.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system sorbose subfamily transporter subunit IIB
L3_072_362G1_scaffold_183_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15445..16293
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8B0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32648.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS sorbose-specific transporter subunit IIC
L3_072_362G1_scaffold_183_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16295..17137
DNA (843bp) protein (281aa)
PTS system, fructose n=2 Tax=Clostridium butyricum RepID=M8JZE9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32649.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_072_362G1_scaffold_183_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17171..17452
DNA (282bp) protein (94aa)
UPI0003D6259C related cluster n=1 Tax=unknown RepID=UPI0003D6259C
Uncharacterized protein {ECO:0000313|EMBL:KHD15252.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
membrane protein
L3_072_362G1_scaffold_183_19
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18035..18865
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR17_CLOP1
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CDM70138.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_362G1_scaffold_183_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18867..19649
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=Q0TR18_CLOP1
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CDM70139.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_362G1_scaffold_183_21
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19678..20709
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR19_CLOP1
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM70140.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_362G1_scaffold_183_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20737..21783
DNA (1047bp) protein (349aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium perfringens RepID=Q0TR20_CLOP1
ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT15673.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_362G1_scaffold_183_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22069..23385
DNA (1317bp) protein (439aa)
Amidohydrolase domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REK4_CLOPF
amidohydrolase domain protein
Amidohydrolase domain protein {ECO:0000313|EMBL:CDM70142.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_362G1_scaffold_183_24
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23450..24439
DNA (990bp) protein (330aa)
Choloylglycine hydrolase {ECO:0000313|EMBL:EQK44180.1}; EC=3.5.1.24 {ECO:0000313|EMBL:EQK44180.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSU6_CLOBI
L3_072_362G1_scaffold_183_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24591..24800)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H581_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEH99552.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_362G1_scaffold_183_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24824..24970)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZS6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES51295.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_072_362G1_scaffold_183_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25531..26496
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBL4_9CLOT
dihydrouridine synthase
L3_072_362G1_scaffold_183_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26680..27615
DNA (936bp) protein (312aa)
Putative Hydrolase, alpha/beta fold family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAR1_9CLOT
Putative Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:CDG02138.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
alpha/beta fold family hydrolase
L3_072_362G1_scaffold_183_29
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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27731..28318
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035C5FF5
TetR family transcriptional regulator {ECO:0000313|EMBL:KHS58052.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
TetR family transcriptional regulator
L3_072_362G1_scaffold_183_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28519..30459
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99343.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NADH:flavin oxidoreductase
Displaying items 1-30 of 64 in total

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