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L3_072_362G1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_188_1
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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1..222
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2D0B6_9CLOT
Transposase IS4 {ECO:0000313|EMBL:KDE69859.1}; TaxID=1441736 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum BFTR-2.;"
L3_072_362G1_scaffold_188_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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360..971
DNA (612bp) protein (204aa)
sodA; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Superoxide dismutase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRG5_CLOSA
L3_072_362G1_scaffold_188_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1174..2841
DNA (1668bp) protein (556aa)
CspA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGP3_CLOBU
CspA {ECO:0000313|EMBL:EEP53997.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
surface protein PspC
L3_072_362G1_scaffold_188_4
Tauraco erythrolophus, Tauraco, Musophagiformes, Aves, Chordata, Metazoa

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2801..3415
DNA (615bp) protein (205aa)
Uncharacterized protein (Fragment) n=1 Tax=Heterocephalus glaber RepID=G5C731_HETGA
Uncharacterized protein {ECO:0000313|EMBL:KFV20182.1}; Flags: Fragment;; TaxID=121530 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Musophagiformes; Musophagidae; Tauraco.;" source="Tauraco erythrolophus (Red-crested turaco).;"
hypothetical protein
L3_072_362G1_scaffold_188_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3586..4086
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E805A5
GAF domain-containing protein {ECO:0000313|EMBL:AJG99532.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
GAF domain-containing protein
L3_072_362G1_scaffold_188_6
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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4317..5192
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VBK8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT69107.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
diguanylate cyclase/phosphodiesterase domain-containing protein
L3_072_362G1_scaffold_188_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5318..6313
DNA (996bp) protein (332aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
arcB; ornithine carbamoyltransferase, catabolic (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5Z3_9CLOT
L3_072_362G1_scaffold_188_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6489..6737)
DNA (249bp) protein (83aa)
Spore coat protein F n=2 Tax=Clostridium botulinum B RepID=B2TRT4_CLOBB
spore coat protein CotF
Spore coat protein F {ECO:0000313|EMBL:ACD24187.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH91173.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_362G1_scaffold_188_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6753..6938)
DNA (186bp) protein (62aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71967.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_072_362G1_scaffold_188_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7029..8768)
DNA (1740bp) protein (580aa)
ftsH3; ATP-dependent zinc metalloprotease FtsH 1 (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRG6_CLOSA
L3_072_362G1_scaffold_188_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9026..10756
DNA (1731bp) protein (577aa)
Myosin-cross-reactive antigen family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWV1_CLOBA
myosin-cross-reactive antigen
Myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:EES50377.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_072_362G1_scaffold_188_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10783..11259
DNA (477bp) protein (159aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JAZ4_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ86422.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane protein
L3_072_362G1_scaffold_188_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11461..12390
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase family protein (EC:4.2.1.46)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYM9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32701.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_072_362G1_scaffold_188_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12556..13998
DNA (1443bp) protein (481aa)
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTH4_CLOSA
L3_072_362G1_scaffold_188_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14377..15249
DNA (873bp) protein (291aa)
Cation efflux rotein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CE13_9CLOT
Cation efflux rotein {ECO:0000313|EMBL:EOR27255.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
cation diffusion facilitator family transporter
L3_072_362G1_scaffold_188_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16031..17206
DNA (1176bp) protein (392aa)
Methyltransferase n=2 Tax=Clostridium butyricum RepID=B1QXM4_CLOBU
Putative RNA methylase {ECO:0000313|EMBL:EEP53919.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyltransferase
L3_072_362G1_scaffold_188_17
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17315..18748
DNA (1434bp) protein (478aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Cardiolipin synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G1Q1_9CLOT
clsC; cardiolipin synthetase
L3_072_362G1_scaffold_188_18
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18894..19676
DNA (783bp) protein (261aa)
ABC transporter related protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWK6_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:EET86359.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
ABC transporter related protein
L3_072_362G1_scaffold_188_19
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19681..21276
DNA (1596bp) protein (532aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N8D3_CLOK5
Membrane protein {ECO:0000313|EMBL:KGK86746.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L3_072_362G1_scaffold_188_20
unknown

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21392..22060
DNA (669bp) protein (223aa)

This feature has no annotations

L3_072_362G1_scaffold_188_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22183..23295)
DNA (1113bp) protein (371aa)
cold-shock deAd box protein a (EC:3.6.1.-)
RNA helicase n=1 Tax=Clostridium botulinum RepID=UPI000306C64C
Uncharacterized protein {ECO:0000313|EMBL:AIY82107.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_072_362G1_scaffold_188_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23655..24467
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98955.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_362G1_scaffold_188_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24596..25411
DNA (816bp) protein (272aa)
Alpha/beta superfamily hydrolase n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F5D7_CLOSG
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:AJD30453.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
alpha/beta superfamily hydrolase
L3_072_362G1_scaffold_188_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25764..27953
DNA (2190bp) protein (730aa)
aga; alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CER7_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:EOR27787.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_072_362G1_scaffold_188_25
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28078..28932)
DNA (855bp) protein (285aa)
AraC family bacterial regulatory protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LLR3_9CLOT
AraC family bacterial regulatory protein {ECO:0000313|EMBL:CDB75027.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
msmR1; Msm operon regulatory protein MsmR
L3_072_362G1_scaffold_188_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29151..29579)
DNA (429bp) protein (143aa)
SUF system FeS assembly protein, NifU family n=2 Tax=Clostridium RepID=A6LUJ3_CLOB8
NifU family SUF system FeS assembly protein
NifU-like protein NifU {ECO:0000313|EMBL:AJG98610.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_072_362G1_scaffold_188_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29586..30815)
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Cysteine desulfurase, SufS subfamily n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5K4_9CLOT
SufS subfamily cysteine desulfurase
L3_072_362G1_scaffold_188_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30808..31908)
DNA (1101bp) protein (367aa)
FeS assembly protein SufD n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5K5_9CLOT
FeS assembly protein SufD {ECO:0000313|EMBL:EHJ00120.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
FeS assembly protein SufD
L3_072_362G1_scaffold_188_29
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31918..33327)
DNA (1410bp) protein (470aa)
Fe-S cluster assembly protein SufB n=1 Tax=Clostridium beijerinckii RepID=UPI0002EF23F3
FeS assembly protein SufB {ECO:0000313|EMBL:AJG98607.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
FeS assembly protein SufB
L3_072_362G1_scaffold_188_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33343..34095)
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUI9_CLOB8
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ABR34019.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Displaying items 1-30 of 76 in total

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