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L3_072_362G1_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_216_1
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

358..945
DNA (588bp) protein (196aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
putative Adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CB32_9BACE
L3_072_362G1_scaffold_216_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1268..2266)
DNA (999bp) protein (333aa)
penicillin amidase (EC:3.5.1.11)
Penicillin amidase {ECO:0000313|EMBL:AGX41964.1}; EC=3.5.1.11 {ECO:0000313|EMBL:AGX41964.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Penicillin amidase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMF7_CLOSA
L3_072_362G1_scaffold_216_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2672..3223)
DNA (552bp) protein (184aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWR5_9CLOT
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EKQ51462.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
membrane-associated phospholipid phosphatase
L3_072_362G1_scaffold_216_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3223..3579)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJR2_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41067.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_362G1_scaffold_216_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4041..4733
DNA (693bp) protein (231aa)
membrane protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F9994B
Membrane protein {ECO:0000313|EMBL:ETD71977.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
SNARE associated Golgi family protein
L3_072_362G1_scaffold_216_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5706..6272
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EBF346
Uncharacterized protein {ECO:0000313|EMBL:EKQ56567.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_362G1_scaffold_216_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6583..8064)
DNA (1482bp) protein (494aa)
Aldehyde dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRM8_CLOPA
Aldehyde dehydrogenase {ECO:0000313|EMBL:AJG97429.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
aldehyde dehydrogenase
L3_072_362G1_scaffold_216_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8830..9510
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002E1E4DD
Uncharacterized protein {ECO:0000313|EMBL:KIL07336.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NERD domain-containing protein
L3_072_362G1_scaffold_216_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9960..10394
DNA (435bp) protein (145aa)
DNA polymerase beta domain protein region n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6W5_9CLOT
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EHJ01645.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DNA polymerase beta domain protein region
L3_072_362G1_scaffold_216_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10381..10791
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX28_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45150.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_216_11
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11006..11266
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MXN6_9THEO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM79266.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
L3_072_362G1_scaffold_216_12
Cellulosilyticum ruminicola, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11863..14109
DNA (2247bp) protein (749aa)
Pectate lyase (Fragment) n=1 Tax=Cellulosilyticum ruminicola RepID=D2KFP9_9FIRM
Pectate lyase {ECO:0000313|EMBL:ACZ98651.1}; Flags: Fragment;; TaxID=425254 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum ruminicola.;"
Pectate lyase/Amb allergen
L3_072_362G1_scaffold_216_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14260..14811)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KPK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB75450.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_072_362G1_scaffold_216_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15346..16380)
DNA (1035bp) protein (345aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F5B632
Periplasmic binding protein {ECO:0000313|EMBL:AJH01560.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ABC-type hemin transport system, periplasmic component
L3_072_362G1_scaffold_216_15
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16441..17214)
DNA (774bp) protein (258aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:ADZ81919.1}; EC=3.6.3.28 {ECO:0000313|EMBL:ADZ81919.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Phosphonate-transporting ATPase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX5_CELLD
L3_072_362G1_scaffold_216_16
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17225..18319)
DNA (1095bp) protein (365aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX6_CELLD
ABC transporter {ECO:0000313|EMBL:KEZ87413.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter permease
L3_072_362G1_scaffold_216_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18569..19411
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX7_CELLD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ81921.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_362G1_scaffold_216_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19401..20138
DNA (738bp) protein (246aa)
Putative hydrolase of the alpha/beta superfamily n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MKT4_9CLOT
putative hydrolase of the alpha/beta superfamily
Putative hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:AGF58549.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_362G1_scaffold_216_19
unknown

Not on your lists

20116..20238
DNA (123bp) protein (41aa)

This feature has no annotations

L3_072_362G1_scaffold_216_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20317..20535)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G640_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJG97805.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein DUF2922
L3_072_362G1_scaffold_216_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20635..20859)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1U4_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJH00707.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_072_362G1_scaffold_216_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20951..21136)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000303FF4D
YvrJ protein family protein {ECO:0000313|EMBL:AJG97807.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_072_362G1_scaffold_216_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21166..21732)
DNA (567bp) protein (189aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVS1_CLOSA
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGX44700.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_216_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21905..22312)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T180_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:AJG97809.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
XRE family transcriptional regulator
L3_072_362G1_scaffold_216_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22566..22766
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G635_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD71531.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_072_362G1_scaffold_216_26
unknown

Not on your lists

22928..23320
DNA (393bp) protein (131aa)

This feature has no annotations

L3_072_362G1_scaffold_216_27
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23532..24410
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G4T4_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD71529.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
phage replisome organizer
L3_072_362G1_scaffold_216_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24699..25556
DNA (858bp) protein (286aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
phage lysozyme (EC:3.2.1.17)
Lysozyme n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USJ4_CLOBO
L3_072_362G1_scaffold_216_29
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26309..27337
DNA (1029bp) protein (343aa)
Putative transposase, YhgA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EI98_9CLOT
Putative transposase, YhgA {ECO:0000313|EMBL:CDG00917.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
putative transposase
L3_072_362G1_scaffold_216_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27584..27757
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LX81_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34961.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Displaying items 1-30 of 63 in total

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