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L3_072_362G1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_256_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

359..559
DNA (201bp) protein (67aa)
Cold shock protein n=10 Tax=Lactobacillus rhamnosus RepID=B5QNB7_LACRH
cspC; Cold shock protein
Cold shock protein CspA {ECO:0000313|EMBL:EKS51173.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_256_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

780..1022
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIF5_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73814.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1245..1745
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIF6_LACRL
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEN80630.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Acetyltransferase, GNAT family
L3_072_362G1_scaffold_256_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1751..2386
DNA (636bp) protein (212aa)
N-acetylmuramidase n=6 Tax=Lactobacillus rhamnosus RepID=C7TIF7_LACRL
acmA; N-acetylmuramidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGP73816.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2574..3155
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Xanthine phosphoribosyltransferase n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JW96_LACRH
Xanthine phosphoribosyltransferase
L3_072_362G1_scaffold_256_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3164..4492
DNA (1329bp) protein (443aa)
Xanthine/uracil permease n=10 Tax=Lactobacillus rhamnosus RepID=B5QNC2_LACRH
pbuX; xanthine permease
Xanthine permease {ECO:0000313|EMBL:AGP73818.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4513..5622
DNA (1110bp) protein (370aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|SAAS:SAAS00249030}; EC=2.1.2.- {ECO:0000256|SAAS:SAAS00248956};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) n=9 Tax=Lactobacillus rhamnosus RepID=C7TIG0_LACRL
ATP-grasp domain-containing protein
L3_072_362G1_scaffold_256_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5725..7020
DNA (1296bp) protein (432aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Adenylosuccinate lyase n=4 Tax=Lactobacillus rhamnosus RepID=C7TIG1_LACRL
purB; adenylosuccinate lyase
L3_072_362G1_scaffold_256_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7078..7209)
DNA (132bp) protein (44aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A1F0_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80636.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_362G1_scaffold_256_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7206..7775)
DNA (570bp) protein (190aa)
ABC family transporter n=9 Tax=Lactobacillus rhamnosus RepID=B5QNC5_LACRH
ABC transporter
ABC family transporter {ECO:0000313|EMBL:EKS51181.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_256_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7785..8531)
DNA (747bp) protein (249aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TIG3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC96927.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_256_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8616..10874)
DNA (2259bp) protein (753aa)
Sulfatase n=5 Tax=Lactobacillus rhamnosus RepID=C7TIG4_LACRL
Lipoteichoic acid synthase LtaS Type IIb {ECO:0000313|EMBL:AGP73826.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ltaS; sulfatase
L3_072_362G1_scaffold_256_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11415..12020
DNA (606bp) protein (202aa)
Glycopeptide antibiotics resistance protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TIG5_LACRL
vanZ like family protein
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:EKS51185.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_256_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12300..13157
DNA (858bp) protein (286aa)
Glucose uptake protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIG6_LACRL
sugar transport family protein
Glucose uptake protein {ECO:0000313|EMBL:AGP73828.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13354..14694
DNA (1341bp) protein (447aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Glucose-6-phosphate isomerase; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Glucose-6-phosphate isomerase n=13 Tax=Lactobacillus RepID=C7TIG7_LACRL
Glucose-6-phosphate isomerase
L3_072_362G1_scaffold_256_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14746..14877
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q7R3_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51251.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Hypothetical protein
L3_072_362G1_scaffold_256_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15042..15329)
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UYJ4_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73831.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15624..16475)
DNA (852bp) protein (284aa)
DNA-entry nuclease n=4 Tax=Lactobacillus rhamnosus RepID=C7TIG9_LACRL
laaO; DNA-entry nuclease
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC96609.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_256_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16475..17218)
DNA (744bp) protein (248aa)
DNA-entry nuclease n=3 Tax=Lactobacillus rhamnosus RepID=S5A418_LACRH
hypothetical protein
DNA-entry nuclease {ECO:0000313|EMBL:AGP73833.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17347..18510)
DNA (1164bp) protein (388aa)
Glycosyl transferase, group 1 n=3 Tax=Lactobacillus rhamnosus RepID=C7TIH1_LACRL
glycosyl transferase group 1
Glycosyltransferase {ECO:0000313|EMBL:KIC96607.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_256_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18967..19884
DNA (918bp) protein (306aa)
Oxidoreductase n=6 Tax=Lactobacillus rhamnosus RepID=C7TIH2_LACRL
oxidoreductase, NAD-binding Rossmann fold family protein
Putative dehydrogenase related protein {ECO:0000313|EMBL:AGP73835.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19985..20452
DNA (468bp) protein (156aa)
Deaminase n=5 Tax=Lactobacillus rhamnosus RepID=C7TBQ1_LACRG
deaminase
Cytosine deaminase {ECO:0000313|EMBL:KIC96605.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_256_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21336..21551
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S5A421_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73838.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_24
unknown

Not on your lists

21736..21834
DNA (99bp) protein (33aa)

This feature has no annotations

L3_072_362G1_scaffold_256_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21847..22047
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JWB6_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN80652.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_072_362G1_scaffold_256_26
unknown

Not on your lists

22284..22385
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_362G1_scaffold_256_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22404..22598
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIH5_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80653.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_362G1_scaffold_256_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23700..23849
DNA (150bp) protein (50aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TIH7_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80656.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_362G1_scaffold_256_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24718..24855
DNA (138bp) protein (46aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TBQ7_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73843.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_256_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24936..26129)
DNA (1194bp) protein (398aa)
Transporter, major facilitator superfamily MFS_1 n=4 Tax=Lactobacillus rhamnosus RepID=C7TII0_LACRL
major facilitator superfamily protein
Permease of the major facilitator superfamily {ECO:0000313|EMBL:AGP73844.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 60 in total

View Taxonomy