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L3_072_362G1_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_265_1
unknown

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2..157
DNA (156bp) protein (52aa)

This feature has no annotations

L3_072_362G1_scaffold_265_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(370..2370)
DNA (2001bp) protein (667aa)
tkt1; transketolase Tkt (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Transketolase Tkt n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MML8_CLOSA
L3_072_362G1_scaffold_265_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2441..3088)
DNA (648bp) protein (216aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBH1_9CLOT
L3_072_362G1_scaffold_265_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3188..4078)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|SAAS:SAAS00086366}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00278209};; EC=4.3.3.7 {ECO:0000256|SAAS:SAAS00086421};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Dihydrodipicolinate synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBX5_9FIRM
dihydrodipicolinate synthetase
L3_072_362G1_scaffold_265_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4293..4769)
DNA (477bp) protein (159aa)
PTS system sorbose subfamily IIB component n=6 Tax=Firmicutes RepID=E4LTC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86916.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system mannose/fructose-specific transporter subunit IIA
L3_072_362G1_scaffold_265_6
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4766..5851)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP60517.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
putative Sugar diacid utilization regulator
L3_072_362G1_scaffold_265_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5997..6404)
DNA (408bp) protein (136aa)
PTS system fructose IIA component n=6 Tax=Firmicutes RepID=E4LTB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88705.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system fructose subfamily transporter subunit IIA
L3_072_362G1_scaffold_265_8
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6418..7020)
DNA (603bp) protein (201aa)
SIS domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPK3_9FIRM
SIS domain protein {ECO:0000313|EMBL:EFP60515.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
sugar isomerase
L3_072_362G1_scaffold_265_9
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7035..7967)
DNA (933bp) protein (311aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFP60514.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFP60514.1};; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPK2_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_072_362G1_scaffold_265_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8039..8893)
DNA (855bp) protein (285aa)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E2SPK1_9FIRM
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ50517.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Man family PTS system transporter subunit IID
L3_072_362G1_scaffold_265_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8890..9636)
DNA (747bp) protein (249aa)
PTS system sorbose-specific iic component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC06_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EEC89775.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
PTS sorbose-specific transporter subunit IIC
L3_072_362G1_scaffold_265_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9661..10143)
DNA (483bp) protein (161aa)
PTS system sorbose subfamily IIB component n=5 Tax=Firmicutes RepID=E4M0B4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88700.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system sorbose subfamily transporter subunit IIB
L3_072_362G1_scaffold_265_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10457..11086
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQ89_9FIRM
KDPG and KHG aldolase {ECO:0000313|EMBL:EFR35519.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
kdgA; 2-keto-3-deoxy-6-phospho-gluconate aldolase
L3_072_362G1_scaffold_265_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11623..12096)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSW5_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42527.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_265_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12392..13357
DNA (966bp) protein (322aa)
ykoT1; glycosyltransferase YkoT (EC:2.4.-.-)
Glycosyltransferase YkoT {ECO:0000313|EMBL:AGX41167.1}; EC=2.4.-.- {ECO:0000313|EMBL:AGX41167.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Glycosyltransferase YkoT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP00_CLOSA
L3_072_362G1_scaffold_265_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13368..13775
DNA (408bp) protein (136aa)
GtrA family protein n=2 Tax=Clostridium RepID=A6LWF7_CLOB8
GtrA family protein {ECO:0000313|EMBL:AJG99564.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
GtrA family protein
L3_072_362G1_scaffold_265_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13838..14452)
DNA (615bp) protein (205aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T842_9CLOT
3-methyladenine DNA glycosylase
L3_072_362G1_scaffold_265_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14689..15639)
DNA (951bp) protein (317aa)
LacX protein n=2 Tax=Clostridium butyricum RepID=B1R1V3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92920.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lacX; protein LacX, chromosomal
L3_072_362G1_scaffold_265_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15642..16151)
DNA (510bp) protein (170aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
anaerobic ribonucleoside-triphosphate reductase-activating protein (EC:1.97.1.-)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Clostridium butyricum RepID=M8K9B5_CLOBU
L3_072_362G1_scaffold_265_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16462..18384)
DNA (1923bp) protein (641aa)
leuC2; 3-isopropylmalate dehydratase large subunit 1 (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit 1 {ECO:0000313|EMBL:AGX41161.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AGX41161.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
3-isopropylmalate dehydratase large subunit 1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN91_CLOSA
L3_072_362G1_scaffold_265_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18451..19644)
DNA (1194bp) protein (398aa)
leuA2; 2-isopropylmalate synthase 2 (EC:2.3.3.13)
2-isopropylmalate synthase 2 {ECO:0000313|EMBL:AGX41160.1}; EC=2.3.3.13 {ECO:0000313|EMBL:AGX41160.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
2-isopropylmalate synthase 2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKM3_CLOSA
L3_072_362G1_scaffold_265_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19979..22087)
DNA (2109bp) protein (703aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U528_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EKQ56007.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
anaerobic ribonucleoside triphosphate reductase
L3_072_362G1_scaffold_265_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22381..22587
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THY3_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY82149.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_072_362G1_scaffold_265_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22853..23539
DNA (687bp) protein (229aa)
Proton-coupled thiamine transporter YuaJ n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXG4_9CLOT
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:EHI97042.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
putative proton-coupled thiamine transporter YuaJ
L3_072_362G1_scaffold_265_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23684..23878)
DNA (195bp) protein (65aa)
Ferredoxin n=4 Tax=Clostridium butyricum RepID=B1R1W1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92353.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ferredoxin
L3_072_362G1_scaffold_265_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24001..24846)
DNA (846bp) protein (282aa)
Protein Mrp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKL8_CLOSA
mrp; protein Mrp
Protein Mrp {ECO:0000313|EMBL:AGX41155.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_265_27
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24867..25703)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQ94_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD66021.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_072_362G1_scaffold_265_28
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25700..26461)
DNA (762bp) protein (254aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRK4_CLOPA
prolipoprotein diacylglyceryl transferase
L3_072_362G1_scaffold_265_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26566..27132)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41152.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_265_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27150..28790)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R1W7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84691.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying items 1-30 of 99 in total

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