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L3_072_362G1_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_324_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..2482
DNA (2481bp) protein (827aa)
Carbamoyl-phosphate synthase large chain {ECO:0000255|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000255|HAMAP-Rule:MF_01210}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=CARB_BIFLS
carbamoyl-phosphate synthase large subunit
L3_072_362G1_scaffold_324_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2552..3472
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW3_BIFLS
putative orotidine 5'-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:ACJ51843.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3652..4242
DNA (591bp) protein (197aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Guanylate kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW4_BIFLS
guanylate kinase
L3_072_362G1_scaffold_324_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4217..4795)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:CEF06353.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_072_362G1_scaffold_324_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4859..5566)
DNA (708bp) protein (236aa)
DNA polymerase III PolC-type {ECO:0000313|EMBL:CEE99822.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CEE99822.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
DNA polymerase III alpha subunit n=12 Tax=Bifidobacterium RepID=B3DQ35_BIFLD
putative exonuclease
L3_072_362G1_scaffold_324_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5713..7968
DNA (2256bp) protein (752aa)
Putative elongation factor n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW6_BIFLS
Small GTP-binding protein {ECO:0000313|EMBL:ACJ51846.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
putative elongation factor
L3_072_362G1_scaffold_324_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7986..8627)
DNA (642bp) protein (214aa)
Phospholipase/Carboxylesterase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW7_BIFLS
phospholipase/Carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ACJ51847.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8861..9499
DNA (639bp) protein (213aa)
Amino acid ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW8_BIFLS
polar amino acid ABC transporter inner membrane subunit
Putative glutamine ABC transporter permease protein GlnP {ECO:0000313|EMBL:CEE96895.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_072_362G1_scaffold_324_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9490..10095
DNA (606bp) protein (202aa)
Amino acid ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPW9_BIFLS
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:KFI68509.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_072_362G1_scaffold_324_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10088..10879
DNA (792bp) protein (264aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX0_BIFLS
ABC transporter
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY26151.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_324_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10945..11847
DNA (903bp) protein (301aa)
Amino acid ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX1_BIFLS
extracellular solute-binding protein, family 3
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ACJ51851.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12018..13250
DNA (1233bp) protein (411aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX2_BIFLS
Cystathionine beta-lyase {ECO:0000313|EMBL:KEY26149.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_324_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13331..13582
DNA (252bp) protein (84aa)
Glutaredoxin-like protein n=2 Tax=Bifidobacterium longum RepID=D6ZVD6_BIFLJ
hypothetical protein
Glutaredoxin-like protein {ECO:0000313|EMBL:ACJ51853.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13675..14463)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B7GPX4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51854.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14479..15282)
DNA (804bp) protein (268aa)
NADP oxidoreductase, coenzyme F420-dependent n=2 Tax=Bifidobacterium longum RepID=B7GPX5_BIFLS
NADP oxidoreductase, coenzyme F420-dependent
NADP oxidoreductase, coenzyme F420-dependent {ECO:0000313|EMBL:ACJ51855.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15541..16584
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX6_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51856.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16635..17798
DNA (1164bp) protein (388aa)
Extracellular ligand-binding receptor n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX7_BIFLS
putative ABC transporter substrate binding component
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACJ51857.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17843..19657
DNA (1815bp) protein (605aa)
Inner-membrane translocator n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPX8_BIFLS
Inner-membrane translocator {ECO:0000313|EMBL:ACJ51858.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
putative ABC transporter permease
L3_072_362G1_scaffold_324_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19664..21478
DNA (1815bp) protein (605aa)
Putative ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQT6_BIFLS
ABC transporter {ECO:0000313|EMBL:KEY26142.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative ABC transporter ATP-binding protein
L3_072_362G1_scaffold_324_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21546..22748
DNA (1203bp) protein (401aa)
Amidohydrolase {ECO:0000313|EMBL:ACJ51860.1}; EC=3.5.1.14 {ECO:0000313|EMBL:ACJ51860.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Amidohydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY0_BIFLS
amidohydrolase
L3_072_362G1_scaffold_324_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22911..24206
DNA (1296bp) protein (432aa)
Cysteine synthase {ECO:0000313|EMBL:ACJ51861.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ACJ51861.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Cysteine synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY1_BIFLS
O-acetylhomoserine/O-acetylserine sulfhydrylase
L3_072_362G1_scaffold_324_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24317..24562
DNA (246bp) protein (82aa)
Glutaredoxin-like protein n=2 Tax=Bifidobacterium RepID=B7GPY2_BIFLS
glutaredoxin-like protein
Glutaredoxin-like protein {ECO:0000313|EMBL:KFI68523.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_072_362G1_scaffold_324_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24775..25533
DNA (759bp) protein (253aa)
ABC transporter {ECO:0000313|EMBL:KFI68524.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI68524.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter related n=3 Tax=Bifidobacterium RepID=B7GPY3_BIFLS
putative amino acid ABC transporter ATP-binding protein
L3_072_362G1_scaffold_324_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25589..26401
DNA (813bp) protein (271aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY4_BIFLS
putative amino acid ABC transporter substrate binding component
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY26137.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_324_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26506..27168
DNA (663bp) protein (221aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Bifidobacterium RepID=B7GPY5_BIFLS
putative amino acid ABC transporter permease
Cysteine ABC transporter permease {ECO:0000313|EMBL:KEY26136.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_072_362G1_scaffold_324_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27440..28357
DNA (918bp) protein (306aa)
Band 7 protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY6_BIFLS
hypothetical protein
FtsH protease regulator HflK {ECO:0000313|EMBL:CEE99013.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_072_362G1_scaffold_324_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28528..29142)
DNA (615bp) protein (205aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY7_BIFLS
Integrase, catalytic region
Integrase, catalytic region {ECO:0000313|EMBL:ACJ51867.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29264..31099
DNA (1836bp) protein (612aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPY8_BIFLS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACJ51868.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_072_362G1_scaffold_324_29
unknown

Not on your lists

comp(31042..31728)
DNA (687bp) protein (229aa)

This feature has no annotations

L3_072_362G1_scaffold_324_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31948..32793)
DNA (846bp) protein (282aa)
Patatin n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPZ0_BIFLS
patatin
Phospholipase {ECO:0000313|EMBL:KEY26130.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Displaying items 1-30 of 54 in total

View Taxonomy