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L3_072_362G1_scaffold_360

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_360_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
L,D-transpeptidase n=1 Tax=Lactobacillus casei Lc-10 RepID=K6RVJ4_LACCA
L,D-transpeptidase {ECO:0000313|EMBL:GAN36089.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_360_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(346..708)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=S2SSP1_LACPA
Uncharacterized protein {ECO:0000313|EMBL:ERN50946.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
hypothetical protein
L3_072_362G1_scaffold_360_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(662..1873)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2UEW7_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPD06867.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
hypothetical protein
L3_072_362G1_scaffold_360_4
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2022..3068)
DNA (1047bp) protein (349aa)
Racemase domain protein n=5 Tax=Lactobacillus casei group RepID=K6SF82_LACCA
Uncharacterized protein {ECO:0000313|EMBL:ERN50947.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
hypothetical protein
L3_072_362G1_scaffold_360_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3058..4644)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp71 RepID=S2S3J5_LACPA
Uncharacterized protein {ECO:0000313|EMBL:ERN50948.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
hypothetical protein
L3_072_362G1_scaffold_360_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4985..6190)
DNA (1206bp) protein (402aa)
Beta-lactamase n=6 Tax=Lactobacillus casei group RepID=U6SJ15_LACCA
Beta-lactamase {ECO:0000313|EMBL:ERN50915.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
beta-lactamase
L3_072_362G1_scaffold_360_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6377..7321)
DNA (945bp) protein (315aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EKQ09142.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EKQ09142.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
UDP-glucose 4-epimerase n=8 Tax=Lactobacillus casei group RepID=K6QZI1_LACCA
NAD-dependent epimerase/dehydratase
L3_072_362G1_scaffold_360_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7462..8124)
DNA (663bp) protein (221aa)
ABC-type amino acid transport system, permease component n=31 Tax=Lactobacillus casei group RepID=D8GA59_LACCZ
amino acid ABC transporter permease
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:GAN41310.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
L3_072_362G1_scaffold_360_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8140..8784)
DNA (645bp) protein (215aa)
Uncharacterized protein n=43 Tax=Lactobacillus casei group RepID=K0NBL1_LACCA
glutamate transport membrane-spanning protein
Glutamine ABC transporter, permease protein {ECO:0000313|EMBL:EPC31604.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
L3_072_362G1_scaffold_360_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8786..9610)
DNA (825bp) protein (275aa)
ABC transporter n=40 Tax=Lactobacillus casei group RepID=C5F896_LACPA
periplasmic-binding component of an ABC superfamily glutamine transporter
Periplasmic-binding component of an ABC superfamily glutamine transporter {ECO:0000313|EMBL:EKQ01911.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_362G1_scaffold_360_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9738..10475)
DNA (738bp) protein (246aa)
Amino acid ABC transporter ATP-binding protein, PAAT family n=45 Tax=Lactobacillus casei group RepID=F2M8R7_LACCC
Amino acid ABC transporter ATP-binding protein, PAAT family
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERN50920.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_362G1_scaffold_360_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10891..11877)
DNA (987bp) protein (329aa)
Uncharacterized protein n=11 Tax=Lactobacillus casei group RepID=K6QZI6_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC85987.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
hypothetical protein
L3_072_362G1_scaffold_360_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11898..12338)
DNA (441bp) protein (147aa)
Uncharacterized protein n=22 Tax=Lactobacillus casei group RepID=F2M8S1_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN36080.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_360_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12630..13076)
DNA (447bp) protein (149aa)
Ferric uptake regulation protein n=51 Tax=Lactobacillus casei group RepID=B3W990_LACCB
Zinc uptake regulation protein ZUR
Zinc uptake regulation protein {ECO:0000313|EMBL:EKQ10169.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_072_362G1_scaffold_360_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13185..13298
DNA (114bp) protein (38aa)
Uncharacterized protein n=39 Tax=Lactobacillus casei group RepID=F2M8S3_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87528.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_360_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13368..13970)
DNA (603bp) protein (201aa)
Guanylate kinase {ECO:0000313|EMBL:EPC31611.1}; EC=2.7.4.8 {ECO:0000313|EMBL:EPC31611.1};; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
Guanylate kinase n=34 Tax=Lactobacillus casei group RepID=K0N9Y7_LACCA
guanylate kinase
L3_072_362G1_scaffold_360_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14087..14494)
DNA (408bp) protein (136aa)
GNAT family Acetyltransferase n=12 Tax=Lactobacillus casei group RepID=C5F8A3_LACPA
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:GAN36077.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_360_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14601..15815)
DNA (1215bp) protein (405aa)
Surface antigen n=8 Tax=Lactobacillus casei group RepID=K6R3F3_LACCA
Surface antigen {ECO:0000313|EMBL:EKQ10173.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
hypothetical protein
L3_072_362G1_scaffold_360_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16122..17396)
DNA (1275bp) protein (425aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
Tyrosine--tRNA ligase n=31 Tax=Lactobacillus casei group RepID=B3W995_LACCB
tyrS; tyrosyl-tRNA synthetase
L3_072_362G1_scaffold_360_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17930..18874)
DNA (945bp) protein (315aa)
CDF family cation diffusion facilitator n=26 Tax=Lactobacillus casei group RepID=B3W996_LACCB
Cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEQ66499.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_362G1_scaffold_360_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19048..19383)
DNA (336bp) protein (112aa)
Cadmium efflux system accessory protein n=51 Tax=Lactobacillus casei group RepID=K0MWU0_LACCA
Transcriptional regulator, ArsR family
Cadmium efflux system accessory protein {ECO:0000313|EMBL:GAN41321.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
L3_072_362G1_scaffold_360_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19558..20487
DNA (930bp) protein (310aa)
Thiamine biosynthesis membrane-associated lipoprotein n=3 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MX93_LACPA
Thiamine biosynthesis lipoprotein
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EPC87521.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_362G1_scaffold_360_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20605..22383)
DNA (1779bp) protein (593aa)
Neopullulanase {ECO:0000313|EMBL:EKP98259.1}; EC=3.2.1.135 {ECO:0000313|EMBL:EKP98259.1};; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
Neopullulanase n=1 Tax=Lactobacillus casei 32G RepID=K6QC45_LACCA
amylopullulanase
L3_072_362G1_scaffold_360_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22633..25041)
DNA (2409bp) protein (803aa)
Glycogen phosphorylase {ECO:0000313|EMBL:EKQ10179.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EKQ10179.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Glycogen phosphorylase n=3 Tax=Lactobacillus casei group RepID=K6RB61_LACCA
glucan phosphorylase
L3_072_362G1_scaffold_360_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25257..26702)
DNA (1446bp) protein (482aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
Glycogen synthase n=33 Tax=Lactobacillus RepID=GLGA_LACC3
Glycogen synthase, ADP-glucose transglucosylase
L3_072_362G1_scaffold_360_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26695..27864)
DNA (1170bp) protein (390aa)
glucose-1-phosphate adenylyltransferase family glycogen biosynthesis protein (EC:2.7.7.-)
Glucose-1-phosphate adenylyltransferase n=13 Tax=Lactobacillus casei group RepID=C5F8B2_LACPA
Glucose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:GAN36068.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_360_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27861..29003)
DNA (1143bp) protein (381aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
Glucose-1-phosphate adenylyltransferase n=43 Tax=Lactobacillus RepID=GLGC_LACC3
L3_072_362G1_scaffold_360_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29000..31099)
DNA (2100bp) protein (700aa)
GH-13 family 1,4-alpha-glucan (glycogen) branching enzyme (EC:3.2.1.- 2.4.1.18)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
GH-13 family 1,4-alpha-glucan (Glycogen) branching enzyme n=2 Tax=Lactobacillus casei group RepID=K6Q171_LACCA
L3_072_362G1_scaffold_360_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31476..32507
DNA (1032bp) protein (344aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Branched-chain-amino-acid aminotransferase n=33 Tax=Lactobacillus casei group RepID=C5F8B5_LACPA
L3_072_362G1_scaffold_360_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32774..33685)
DNA (912bp) protein (304aa)
FliK family flagellar hook-length control protein n=2 Tax=Lactobacillus casei group RepID=K6QB74_LACCA
FliK family flagellar hook-length control protein
Uncharacterized protein {ECO:0000313|EMBL:EEI68367.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Displaying items 1-30 of 37 in total

View Taxonomy