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L3_072_362G1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_379_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..903)
DNA (903bp) protein (301aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_00734};; D-tagatose-1,6-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Tagatose 1,6-diphosphate aldolase n=6 Tax=Lactobacillus rhamnosus RepID=C7TGZ4_LACRL
deoC/LacD aldolase family protein
L3_072_362G1_scaffold_379_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(936..1454)
DNA (519bp) protein (173aa)
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KIC98898.1}; EC=5.3.1.26 {ECO:0000313|EMBL:KIC98898.1};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Galactose-6-phosphate isomerase subunit LacB n=11 Tax=Lactobacillus rhamnosus RepID=B5QJP8_LACRH
lacB; galactose-6-phosphate isomerase subunit LacB
L3_072_362G1_scaffold_379_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1495..1923)
DNA (429bp) protein (143aa)
Galactose-6-phosphate isomerase LacA subunit {ECO:0000313|EMBL:EKS54094.1}; EC=5.3.1.26 {ECO:0000313|EMBL:EKS54094.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Galactose-6-phosphate isomerase subunit LacA n=14 Tax=Lactobacillus RepID=B5QJP7_LACRH
lacA; galactose-6-phosphate isomerase subunit LacA
L3_072_362G1_scaffold_379_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1927..2604)
DNA (678bp) protein (226aa)
Lactose transport regulator n=9 Tax=Lactobacillus rhamnosus RepID=B5QJP6_LACRH
Lactose phosphotransferase system repressor
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KIC98896.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_379_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3043..3669)
DNA (627bp) protein (209aa)
Phosphatase n=4 Tax=Lactobacillus rhamnosus RepID=C7TGZ8_LACRL
phosphatase
Phosphatase {ECO:0000313|EMBL:KIC98895.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_379_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3732..4856
DNA (1125bp) protein (375aa)
Exonuclease n=5 Tax=Lactobacillus rhamnosus RepID=C7TGZ9_LACRL
sbcD; exonuclease SbcCD subunit D
Exonuclease SbcD {ECO:0000313|EMBL:AGP73338.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4853..7984
DNA (3132bp) protein (1044aa)
DNA repair ATPase n=4 Tax=Lactobacillus rhamnosus RepID=C7TH00_LACRL
sbcC; exonuclease
Exonuclease SbcC {ECO:0000313|EMBL:AGP73339.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8253..8396
DNA (144bp) protein (48aa)
Uncharacterized protein n=11 Tax=Lactobacillus RepID=S4ZVA3_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN73642.1}; TaxID=219334 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei subsp. casei ATCC 393.;"
L3_072_362G1_scaffold_379_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9010..9486
DNA (477bp) protein (159aa)
Molecular chaperone (Small heat shock protein) n=12 Tax=Lactobacillus rhamnosus RepID=B5QJN6_LACRH
hsp1; small heat shock protein
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:EKS54102.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_379_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9646..10881
DNA (1236bp) protein (412aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EEN78895.1}; EC=3.2.2.- {ECO:0000313|EMBL:EEN78895.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA glycosylase n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2HEF5_LACRH
A/G-specific adenine glycosylase
L3_072_362G1_scaffold_379_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10952..11764
DNA (813bp) protein (271aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2K1C3_LACRH
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEN78896.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
esterase/lipase
L3_072_362G1_scaffold_379_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11710..12429
DNA (720bp) protein (240aa)
NAD(P)H oxidoreductase n=9 Tax=Lactobacillus rhamnosus RepID=C7TH05_LACRL
NAD(P)H oxidoreductase/putative NADPH-quinone reductase/flavodoxin 2
NAD(P)H oxidoreductase YRKL/Putative NADPH-quinone reductase (Modulator of drug activity B)/Flavodoxin 2 {ECO:0000313|EMBL:AGP73345.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12426..12605
DNA (180bp) protein (60aa)
Conserved protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TAD1_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54106.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_379_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12879..13403
DNA (525bp) protein (175aa)
Conserved protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TAD2_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54107.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_379_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13594..14418)
DNA (825bp) protein (275aa)
Hydroxymethylpyrimidine phosphate kinase ThiD n=5 Tax=Lactobacillus rhamnosus RepID=S5A1K0_LACRH
Hydroxymethylpyrimidine phosphate kinase ThiD
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:AGP73349.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14508..15569)
DNA (1062bp) protein (354aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TH09_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73350.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15562..16395)
DNA (834bp) protein (278aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TH10_LACRL
Exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:AGP73351.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16567..17220
DNA (654bp) protein (218aa)
NADH-flavin reductase n=5 Tax=Lactobacillus rhamnosus RepID=C7TH11_LACRL
ywnB; NADH-flavin reductase
NADH-flavin reductase {ECO:0000313|EMBL:KIC98886.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_362G1_scaffold_379_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18045..20432
DNA (2388bp) protein (796aa)
Beta-glucosidase (GH3) n=6 Tax=Lactobacillus rhamnosus RepID=C7TH12_LACRL
Beta-glucosidase {ECO:0000313|EMBL:AGP73355.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
bglB; thermostable beta-glucosidase B
L3_072_362G1_scaffold_379_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21183..22139
DNA (957bp) protein (319aa)
ABC transporter, substrate-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH15_LACRL
ATU2672; ABC transporter substrate-binding protein
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:AGP73358.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22727..23692
DNA (966bp) protein (322aa)
ABC transporter substrate binding family protein n=7 Tax=Lactobacillus rhamnosus RepID=G7UX03_LACRH
ABC transporter substrate binding family protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKS54116.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_362G1_scaffold_379_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23721..24692
DNA (972bp) protein (324aa)
ABC transporter permease n=9 Tax=Lactobacillus rhamnosus RepID=C7TAE2_LACRG
branched-chain amino acid transport system / permease component family protein
ABC transporter permease protein {ECO:0000313|EMBL:AGP73361.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24694..25497
DNA (804bp) protein (268aa)
ABC-type uncharacterized transport system, ATPase component n=9 Tax=Lactobacillus rhamnosus RepID=B5QJC3_LACRH
ABC transporter family protein
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP73362.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25588..26631)
DNA (1044bp) protein (348aa)
Zinc-binding alcohol dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TH19_LACRL
Alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGP73363.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26690..29356)
DNA (2667bp) protein (889aa)
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEN78890.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEN78890.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Cation-transporting ATPase n=5 Tax=Lactobacillus rhamnosus RepID=S5A1L1_LACRH
Cation-transporting ATPase
L3_072_362G1_scaffold_379_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29818..30795)
DNA (978bp) protein (326aa)
Glycosyl transferase, group 2 n=6 Tax=Lactobacillus rhamnosus RepID=C7TAE7_LACRG
glycosyl transferase 2 family protein
Glycosyltransferase {ECO:0000313|EMBL:AGP73366.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30826..33024)
DNA (2199bp) protein (733aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase of PMT family protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH23_LACRL
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KIC98876.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L3_072_362G1_scaffold_379_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33011..33418)
DNA (408bp) protein (136aa)
Conserved membrane protein, GtcA family n=7 Tax=Lactobacillus rhamnosus RepID=C7TAE9_LACRG
gtrA-like family protein
Conserved membrane protein, GtcA family {ECO:0000313|EMBL:AGP73368.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33917..34141
DNA (225bp) protein (75aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TH26_LACRL
ATP-dependent nuclease, subunit B
ATP-dependent nuclease, subunit B {ECO:0000313|EMBL:AGP73370.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_362G1_scaffold_379_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34138..34833
DNA (696bp) protein (232aa)
Two-component response regulator n=4 Tax=Lactobacillus rhamnosus RepID=C7TH27_LACRL
transcriptional regulatory, C terminal family protein
Two component system response regulator CiaR {ECO:0000313|EMBL:AGP73371.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 35 in total

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