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L3_072_362G1_scaffold_416

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_416_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(119..784)
DNA (666bp) protein (222aa)
Voltage gated chloride channel family protein n=165 Tax=Clostridium difficile RepID=T3IP16_CLODC
hypothetical protein
Chloride transporter, ClC family {ECO:0000313|EMBL:EHJ28554.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_416_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(944..1480)
DNA (537bp) protein (179aa)
Uncharacterized protein n=31 Tax=Clostridium difficile RepID=T2VI80_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69413.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_072_362G1_scaffold_416_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1553..1966)
DNA (414bp) protein (138aa)
Uncharacterized protein n=152 Tax=Clostridium difficile RepID=T3ISQ7_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77703.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_416_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2432..3070
DNA (639bp) protein (213aa)
Laminin Domain I family protein n=1 Tax=Clostridium difficile CD34 RepID=T2W3L0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS83900.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
plasmid-related protein
L3_072_362G1_scaffold_416_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3678..3857)
DNA (180bp) protein (60aa)
Methyltransferase domain protein n=95 Tax=Clostridium difficile RepID=T3I9H8_CLODC
conserved hypothetical protein
Methyltransferase domain protein {ECO:0000313|EMBL:EQE69470.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_416_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4083..4616)
DNA (534bp) protein (178aa)
ogt1; Methylated-DNA-[protein]-cysteineS-methyltransfe rase 1 (EC:2.1.1.63)
Methylated-DNA-(Protein)-cysteine S-methyltransferase 1 {ECO:0000313|EMBL:CCL24787.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CCL24787.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Methylated-DNA-[]-cysteine S-methyltransferase family protein n=2 Tax=Clostridium difficile RepID=T4PVI5_CLODI
L3_072_362G1_scaffold_416_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4933..5283
DNA (351bp) protein (117aa)
Uncharacterized protein n=101 Tax=Clostridium difficile RepID=G6BX10_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG77734.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
conserved hypothetical protein
L3_072_362G1_scaffold_416_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6160..6732)
DNA (573bp) protein (191aa)
Manganese containing catalase family protein n=2 Tax=Clostridium difficile RepID=T4PVP3_CLODI
cotCB; Spore-coat protein, manganese catalase
Spore-coat protein {ECO:0000313|EMBL:CCL24784.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_362G1_scaffold_416_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6794..7057)
DNA (264bp) protein (88aa)
CotJB family protein n=191 Tax=Clostridium difficile RepID=T3IFP8_CLODC
cotF; Spore coat peptide assembly protein CotF
CotJB family protein {ECO:0000313|EMBL:EQE69471.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_416_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7057..7278)
DNA (222bp) protein (74aa)
Spore coat associated JA family protein n=2 Tax=Clostridium difficile RepID=T4PVI0_CLODI
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ28563.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_416_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7799..8335)
DNA (537bp) protein (179aa)
ParB-like nuclease domain protein n=192 Tax=Clostridium difficile RepID=T3IB34_CLODC
putative nuclease, ParB-like
ParB-like nuclease domain protein {ECO:0000313|EMBL:EQG77973.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_416_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8353..9666)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=179 Tax=Clostridium difficile RepID=T3ICP1_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77958.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_416_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10021..10461
DNA (441bp) protein (147aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=T3IB82_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69473.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_416_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10646..10834)
DNA (189bp) protein (63aa)
Uncharacterized protein n=101 Tax=Clostridium difficile RepID=G6BX17_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77669.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_416_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11801..12196
DNA (396bp) protein (132aa)
Uncharacterized protein n=24 Tax=Clostridium difficile RepID=U4AII7_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE69462.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_072_362G1_scaffold_416_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12239..14338
DNA (2100bp) protein (700aa)
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EQE69480.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EQE69480.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Cadmium-translocating P-type ATPase n=14 Tax=Clostridium difficile RepID=T2XRN1_CLODI
ATPase
L3_072_362G1_scaffold_416_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14563..19773)
DNA (5211bp) protein (1737aa)
50S ribosome-binding GTPase family protein n=2 Tax=Clostridium difficile RepID=T4PPI7_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67422.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_416_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19788..22283)
DNA (2496bp) protein (832aa)
ChvD family ATP-binding cassette protein n=2 Tax=Clostridium difficile RepID=T4PVN2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CAJ67421.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
conserved hypothetical protein
L3_072_362G1_scaffold_416_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22873..23160)
DNA (288bp) protein (96aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=C9XKM7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL32589.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_362G1_scaffold_416_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23180..23455)
DNA (276bp) protein (92aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=G6BX23_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24772.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
uncharacterised protein
L3_072_362G1_scaffold_416_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24092..24271)
DNA (180bp) protein (60aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6BX24_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24771.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L3_072_362G1_scaffold_416_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24556..26022)
DNA (1467bp) protein (489aa)
Bacterial regulatory s, gntR family protein n=2 Tax=Clostridium difficile RepID=T4PPI1_CLODI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDT80411.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, GntR family
L3_072_362G1_scaffold_416_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27054..28232
DNA (1179bp) protein (393aa)
Diguanylate cyclase domain protein n=2 Tax=Clostridium difficile RepID=T4PVM8_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77461.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative diguanylate kinase signaling protein
L3_072_362G1_scaffold_416_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28234..29463
DNA (1230bp) protein (410aa)
Diguanylate cyclase domain protein n=2 Tax=Clostridium difficile RepID=T4PWH3_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQE69474.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative diguanylate kinase signaling protein
L3_072_362G1_scaffold_416_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29511..29657
DNA (147bp) protein (49aa)
Putative signaling protein n=1 Tax=Clostridium difficile CD002 RepID=U3VVZ8_CLODI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFH08541.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
two-component hybrid sensor kinase/response regulator
L3_072_362G1_scaffold_416_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30081..32648)
DNA (2568bp) protein (856aa)
Putative pyruvate phosphate dikinase,PEP/pyruvate-binding {ECO:0000313|EMBL:CCL24765.1}; EC=2.7.-.- {ECO:0000313|EMBL:CCL24765.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative pyruvate phosphatedikinase,PEP/pyruvate-binding (EC:2.7.-.-)
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein n=2 Tax=Clostridium difficile RepID=T4PVG7_CLODI
L3_072_362G1_scaffold_416_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32651..33256)
DNA (606bp) protein (202aa)
Bacterial regulatory s, tetR family protein n=61 Tax=Clostridium difficile RepID=T2VF30_CLODI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHJ28309.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_416_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33646..35106)
DNA (1461bp) protein (487aa)
gapN; Glyceraldehyde-3-phosphate dehydrogenase(NADP(+)) (GADPH) (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase(NADP(+)) (GADPH) {ECO:0000313|EMBL:CEJ97112.1}; EC=1.2.1.9 {ECO:0000313|EMBL:CEJ97112.1};; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:CKH66480.1}; EC=1.2.1.9 {ECO:0000313|EMBL:CKH66480.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (GADPH) n=141 Tax=Clostridium difficile RepID=Q189C4_CLOD6
L3_072_362G1_scaffold_416_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35447..36025
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=60 Tax=Clostridium difficile RepID=Q189C5_CLOD6
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ97111.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_362G1_scaffold_416_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36316..37566
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily protein n=9 Tax=Clostridium difficile RepID=T2V4X0_CLODI
efflux protein
Efflux protein {ECO:0000313|EMBL:CKH66538.1}; Putative efflux protein {ECO:0000313|EMBL:CDS83875.1}; Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CDS83770.1}; Transporter, Major Facilitator Superfamily(MFS) {ECO:0000313|EMBL:CEJ97110.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 31 in total

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