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L3_072_362G1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_445_1
unknown

Not on your lists

1..102
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_362G1_scaffold_445_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

627..743
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAE5_BIFDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09781.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_445_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

828..956
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1SAG0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETO96369.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_445_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1062..1250
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1SAF9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09783.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_445_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1316..1762
DNA (447bp) protein (149aa)
FHA domain protein n=4 Tax=Bifidobacterium dentium RepID=B1SAF8_9BIFI
hypothetical protein
Putative oxoglutarate dehydrogenase inhibitor {ECO:0000313|EMBL:ETO96346.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_445_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1880..2482
DNA (603bp) protein (201aa)
Transcriptional regulator, MerR family n=2 Tax=Bifidobacterium dentium RepID=D2QAE9_BIFDB
MerR family transcriptional regulator
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27097.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_445_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2573..2956
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6C4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42198.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_362G1_scaffold_445_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3090..3815)
DNA (726bp) protein (242aa)
HAD superfamily hydrolase (EC:3.1.3.18)
HAD superfamily hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2QAF1_BIFDB
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ETO96169.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_445_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3919..4266)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=4 Tax=Bifidobacterium dentium RepID=D2QAF2_BIFDB
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_445_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4358..6931)
DNA (2574bp) protein (858aa)
Helicase n=2 Tax=Bifidobacterium dentium RepID=D2QAF3_BIFDB
helY; helicase
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27101.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_445_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6984..7301)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6C0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42194.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_362G1_scaffold_445_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7311..9227)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6B9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42193.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_362G1_scaffold_445_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9366..10796)
DNA (1431bp) protein (477aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ADB09792.1}; EC=2.7.7.9 {ECO:0000313|EMBL:ADB09792.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAF6_BIFDB
L3_072_362G1_scaffold_445_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11295..11711
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1SA97_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09793.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_445_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11791..13920)
DNA (2130bp) protein (710aa)
bifunctional cytidylate kinase/GTP-binding protein (EC:6.3.2.1)
Bifunctional cytidylate kinase/GTP-binding protein n=2 Tax=Bifidobacterium dentium RepID=D2QAF8_BIFDB
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_445_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13917..14690)
DNA (774bp) protein (258aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Pseudouridine synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q6B5_9BIFI
RNA pseudouridylate synthase
L3_072_362G1_scaffold_445_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14830..15774
DNA (945bp) protein (315aa)
Transporter, major intrinsic protein (MIP) family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6B4_9BIFI
Transporter, major intrinsic protein (MIP) family protein {ECO:0000313|EMBL:EFM42188.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MIP family channel protein
L3_072_362G1_scaffold_445_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15691..15972)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6B3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42187.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_362G1_scaffold_445_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16100..17728)
DNA (1629bp) protein (543aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SA92_9BIFI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_445_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17676..19058)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SA91_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27110.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_445_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19055..19978)
DNA (924bp) protein (308aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SA90_9BIFI
L3_072_362G1_scaffold_445_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19981..21174)
DNA (1194bp) protein (398aa)
Succinate-CoA ligase, beta subunit {ECO:0000313|EMBL:ETO96311.1}; EC=6.2.1.- {ECO:0000313|EMBL:ETO96311.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinate-CoA ligase, beta subunit n=3 Tax=Bifidobacterium dentium RepID=B1SA89_9BIFI
L3_072_362G1_scaffold_445_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21222..21803)
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
adenine phosphoribosyltransferase (APRT) (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q6A8_9BIFI
L3_072_362G1_scaffold_445_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21911..22318)
DNA (408bp) protein (136aa)
Preprotein translocase, YajC subunit n=2 Tax=Bifidobacterium dentium RepID=E0Q6A7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27114.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
yajC; protein translocase subunit YajC
L3_072_362G1_scaffold_445_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22376..23449)
DNA (1074bp) protein (358aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Bifidobacterium dentium RepID=E0Q6A6_9BIFI
ruvB; Holliday junction DNA helicase ruvB
L3_072_362G1_scaffold_445_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23461..24078)
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SA85_9BIFI
holliday junction ATP-dependent DNA helicase ruvA
L3_072_362G1_scaffold_445_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24123..24692)
DNA (570bp) protein (190aa)
ruvC; Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Crossover junction endodeoxyribonuclease RuvC n=4 Tax=Bifidobacterium dentium RepID=D2QAG9_BIFDB
L3_072_362G1_scaffold_445_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24699..25454)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein BDP_1178 n=4 Tax=Bifidobacterium dentium RepID=D2QAH0_BIFDB
hypothetical protein
Probable transcriptional regulatory protein BDP_1178 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_445_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25508..26749)
DNA (1242bp) protein (414aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFM42176.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFM42176.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
capsular polysaccharide biosynthesis protein (EC:2.4.1.57)
Glycosyltransferase, group 1 family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6A2_9BIFI
L3_072_362G1_scaffold_445_30
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26706..27662)
DNA (957bp) protein (319aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=2 Tax=Bifidobacterium dentium RepID=E1N7Z6_9BIFI
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase domain protein {ECO:0000313|EMBL:ETO96372.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
branched-chain amino acid transport ATP-binding protein
Displaying items 1-30 of 40 in total

View Taxonomy