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L3_072_362G1_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_450_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(339..620)
DNA (282bp) protein (94aa)
LysR family transcriptional regulator n=1 Tax=Clostridium arbusti RepID=UPI00028A2711
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:ERK29232.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
transcriptional regulator
L3_072_362G1_scaffold_450_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

771..1460
DNA (690bp) protein (230aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T4H9_9CLOT
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EKQ54443.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_362G1_scaffold_450_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1691..3100
DNA (1410bp) protein (470aa)
Pts system, trehalose-specific iibc component {ECO:0000313|EMBL:EES49918.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EES49918.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
treP; PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
Pts system, trehalose-specific iibc component n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUF2_CLOBO
L3_072_362G1_scaffold_450_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3173..4831
DNA (1659bp) protein (553aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EES50717.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EES50717.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUF3_CLOBO
L3_072_362G1_scaffold_450_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4867..5577
DNA (711bp) protein (237aa)
Trehalose operon repressor n=2 Tax=Clostridium botulinum B RepID=B2TIB9_CLOBB
treR; trehalose operon repressor
Trehalose operon transcriptional repressor {ECO:0000313|EMBL:CDH90728.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_362G1_scaffold_450_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5655..6854)
DNA (1200bp) protein (400aa)
Putative amidase domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVF9_CLOSA
putative amidase domain protein
Putative amidase domain protein {ECO:0000313|EMBL:AGX44789.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_450_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6887..7771)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99890.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_072_362G1_scaffold_450_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8308..9549
DNA (1242bp) protein (414aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7B3_CLOBU
Secreted protein containing uncharacterized conserved protein of ErfK family {ECO:0000313|EMBL:KJZ84265.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_072_362G1_scaffold_450_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9777..12077
DNA (2301bp) protein (767aa)
Phage infection protein Pip n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN06_CLOSA
pip1; phage infection protein Pip
Phage infection protein Pip {ECO:0000313|EMBL:AGX42194.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_450_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12103..12621
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G7E3_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJG97719.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_072_362G1_scaffold_450_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12609..14015
DNA (1407bp) protein (469aa)
Glucan-binding domain-containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWL0_9CLOT
Glucan-binding domain-containing protein {ECO:0000313|EMBL:EKQ50508.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
glucan-binding domain-containing protein
L3_072_362G1_scaffold_450_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14446..16431
DNA (1986bp) protein (662aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUU5_CLOSA
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_450_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16451..17380
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
miaA; tRNA dimethylallyltransferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Clostridium butyricum RepID=B1R0E5_CLOBU
L3_072_362G1_scaffold_450_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17423..17656
DNA (234bp) protein (78aa)
RNA-binding protein Hfq n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9Z3_9CLOT
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RNA chaperone Hfq
L3_072_362G1_scaffold_450_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17729..19015
DNA (1287bp) protein (429aa)
Aluminum resistance family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQZ2_CLOSA
aluminum resistance family protein
Aluminum resistance family protein {ECO:0000313|EMBL:AGX43224.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_450_16
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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19413..21026
DNA (1614bp) protein (538aa)
N-acetylglucosamine-6-phosphate deacetylase protein {ECO:0000313|EMBL:ERJ11201.1}; EC=3.5.1.25 {ECO:0000313|EMBL:ERJ11201.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
N-acetylglucosamine-6-phosphate deacetylase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E8I0_9BACT
amidohydrolase
L3_072_362G1_scaffold_450_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21095..21703)
DNA (609bp) protein (203aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
lexA2; LexA repressor LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1D4_9CLOT
L3_072_362G1_scaffold_450_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21900..22553
DNA (654bp) protein (218aa)
deoxyguanosIne kinase (EC:2.7.1.113)
DeoxyguanosIne kinase {ECO:0000313|EMBL:EES50319.1}; EC=2.7.1.113 {ECO:0000313|EMBL:EES50319.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
DeoxyguanosIne kinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2W0_CLOBA
L3_072_362G1_scaffold_450_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22630..23064
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LWI5_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34715.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_362G1_scaffold_450_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23176..23712
DNA (537bp) protein (179aa)
Putative lipoprotein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V273_CLOBA
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KIL07186.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_362G1_scaffold_450_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23803..24888)
DNA (1086bp) protein (362aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRI2_CLOSA
xerC2; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_450_22
unknown

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25531..25647
DNA (117bp) protein (39aa)

This feature has no annotations

L3_072_362G1_scaffold_450_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25660..26139
DNA (480bp) protein (160aa)
yjdI; putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI (EC:4.2.-.-)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQY7_CLOSA
L3_072_362G1_scaffold_450_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26272..26418
DNA (147bp) protein (49aa)
Putative ATPase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2D6_9CLOT
Putative ATPase {ECO:0000313|EMBL:EKQ54417.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
AAA ATPase
L3_072_362G1_scaffold_450_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26732..28102)
DNA (1371bp) protein (457aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=MIAB_CLOBA
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L3_072_362G1_scaffold_450_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28197..30221)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRY6_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD67049.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_072_362G1_scaffold_450_27
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

30800..31336
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacterium RepID=I3WBR0_THESW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB20436.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L3_072_362G1_scaffold_450_28
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31626..32735)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87421.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_072_362G1_scaffold_450_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32941..33393)
DNA (453bp) protein (151aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J9H8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92281.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell wall binding repeat-containing protein
L3_072_362G1_scaffold_450_30
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(33698..34045)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VD23_9ACTO
Membrane protein {ECO:0000313|EMBL:KJY45904.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
aminopeptidase
Displaying items 1-30 of 32 in total

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