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L3_072_362G1_scaffold_451

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_451_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_362G1_scaffold_451_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

650..1189
DNA (540bp) protein (180aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Bifidobacterium dentium RepID=D2QB20_BIFDB
L3_072_362G1_scaffold_451_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1364..3688)
DNA (2325bp) protein (775aa)
relA1; GTP pyrophosphokinase/Guanosine 3',5'-bis(Diphosphate)3'-pyrophosphohydrolase (EC:2.7.6.5)
RelA1 GTP pyrophosphokinase/Guanosine 3',5'-bis(Diphosphate)3'-pyrophosphohydrolase n=2 Tax=Bifidobacterium dentium RepID=D2QB21_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27326.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_451_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3794..4270)
DNA (477bp) protein (159aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium dentium RepID=E0Q5R1_9BIFI
L3_072_362G1_scaffold_451_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4270..4563)
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8J1_9BIFI
hypothetical protein
PF13834 domain protein {ECO:0000313|EMBL:ETO96328.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_451_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4715..5734
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41983.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA binding protein
L3_072_362G1_scaffold_451_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5750..6940)
DNA (1191bp) protein (397aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q8_9BIFI
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EFM41982.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
nucleotide pyrophosphatase
L3_072_362G1_scaffold_451_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7167..9860
DNA (2694bp) protein (898aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gyrA2; DNA gyrase subunit A (EC:5.99.1.3)
GyrA2 DNA gyrase subunit A n=2 Tax=Bifidobacterium dentium RepID=D2QB26_BIFDB
L3_072_362G1_scaffold_451_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9864..14639)
DNA (4776bp) protein (1592aa)
DEAD/DEAH box helicase n=2 Tax=Bifidobacterium dentium RepID=E1N9L6_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27332.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
lhr; ATP-dependent helicase lhr
L3_072_362G1_scaffold_451_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14636..14860)
DNA (225bp) protein (75aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q4_9BIFI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFM41978.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
XRE family transcriptional regulator
L3_072_362G1_scaffold_451_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14862..15395)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8I4_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27334.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
hypothetical protein
L3_072_362G1_scaffold_451_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15552..16958
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8I3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27335.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
hypothetical protein
L3_072_362G1_scaffold_451_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16943..18175)
DNA (1233bp) protein (411aa)
Multidrug resistance protein n=2 Tax=Bifidobacterium dentium RepID=D2QB31_BIFDB
Transporter, major facilitator domain protein {ECO:0000313|EMBL:ETO96119.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
multidrug resistance protein
L3_072_362G1_scaffold_451_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18337..18525)
DNA (189bp) protein (63aa)
gyrB2; DNA gyrase subunit B (EC:5.99.1.3)
GyrB2 DNA gyrase subunit B {ECO:0000313|EMBL:ADB10018.1}; EC=5.99.1.3 {ECO:0000313|EMBL:ADB10018.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
GyrB2 DNA gyrase subunit B n=2 Tax=Bifidobacterium dentium RepID=D2QB32_BIFDB
L3_072_362G1_scaffold_451_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18625..20673)
DNA (2049bp) protein (683aa)
gyrB2; DNA gyrase subunit B (EC:5.99.1.3)
GyrB2 DNA gyrase subunit B n=2 Tax=Bifidobacterium dentium RepID=D2QB32_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27337.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_451_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20773..22158)
DNA (1386bp) protein (462aa)
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N9L0_9BIFI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
RNA polymerase sigma factor
L3_072_362G1_scaffold_451_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22305..23030)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5P8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41972.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_362G1_scaffold_451_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23239..24318
DNA (1080bp) protein (360aa)
idsA; polyprenyl synthase (EC:2.5.1.30)
IdsA Polyprenyl synthase {ECO:0000313|EMBL:ADB10021.1}; EC=2.5.1.30 {ECO:0000313|EMBL:ADB10021.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Polyprenyl synthetase n=2 Tax=Bifidobacterium dentium RepID=E0Q5P7_9BIFI
L3_072_362G1_scaffold_451_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24439..26598
DNA (2160bp) protein (720aa)
pknA2; serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8H7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27341.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_451_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26639..27328)
DNA (690bp) protein (230aa)
plsC2; s1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
PlsC2 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ADB10023.1}; EC=2.3.1.51 {ECO:0000313|EMBL:ADB10023.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
PlsC2 1-acyl-sn-glycerol-3-phosphate acyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2QB37_BIFDB
L3_072_362G1_scaffold_451_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27380..27934
DNA (555bp) protein (185aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8H5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96150.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
membrane protein
L3_072_362G1_scaffold_451_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28114..29166)
DNA (1053bp) protein (351aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Anthranilate phosphoribosyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q5P3_9BIFI
trpD; anthranilate phosphoribosyltransferase
L3_072_362G1_scaffold_451_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29397..32273)
DNA (2877bp) protein (959aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QB40_BIFDB
secA; protein translocase subunit secA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_451_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32466..33122)
DNA (657bp) protein (219aa)
Ribosomal subunit interface protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTI3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27346.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
30S ribosomal protein S30
L3_072_362G1_scaffold_451_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33652..34329)
DNA (678bp) protein (226aa)
Regulatory protein RecX n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N9K1_9BIFI
Regulatory protein RecX {ECO:0000313|EMBL:ETO96176.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
RecX family transcriptional regulator
L3_072_362G1_scaffold_451_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(34333..35493)
DNA (1161bp) protein (387aa)
Protein RecA n=11 Tax=Bifidobacterium RepID=D2QB43_BIFDB
recA; RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying 26 items

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