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L3_072_362G1_scaffold_466

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_466_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1169)
DNA (1167bp) protein (389aa)
sugar ABC transporter ATPase (EC:3.6.3.17)
ABC-type sugar transporter, ATPase component {ECO:0000313|EMBL:ADB08854.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ADB08854.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9W4_9BIFI
L3_072_362G1_scaffold_466_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1321..2319)
DNA (999bp) protein (333aa)
LacI-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7N2_BIFDB
LacI family transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:ADB08853.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_466_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2796..3860)
DNA (1065bp) protein (355aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E1NC25_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO95942.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L3_072_362G1_scaffold_466_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4064..4621)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7U2_9BIFI
FMN-binding domain protein {ECO:0000313|EMBL:ETO95982.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lipoprotein
L3_072_362G1_scaffold_466_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4650..5462)
DNA (813bp) protein (271aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9W8_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95948.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_466_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5465..6811)
DNA (1347bp) protein (449aa)
ABC-type transporter, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q7A3_BIFDB
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFM40744.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter permease
L3_072_362G1_scaffold_466_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6801..8144)
DNA (1344bp) protein (448aa)
Efflux ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9X0_9BIFI
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:ETO96001.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease
L3_072_362G1_scaffold_466_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8166..9437)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9X1_9BIFI
Membrane protein, PF10080 family {ECO:0000313|EMBL:ETO95966.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_362G1_scaffold_466_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9522..10184)
DNA (663bp) protein (221aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7U7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM40747.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_362G1_scaffold_466_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10216..11961)
DNA (1746bp) protein (582aa)
Iron permease FTR1 family n=2 Tax=Bifidobacterium dentium RepID=E0Q9X3_9BIFI
Iron permease FTR1 domain protein {ECO:0000313|EMBL:ETO95928.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
high-affinity Fe2+/Pb2+ permease
L3_072_362G1_scaffold_466_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12295..13611)
DNA (1317bp) protein (439aa)
MFS-type transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q798_BIFDB
MFS-type transporter
MFS-type transporter {ECO:0000313|EMBL:ADB08844.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_362G1_scaffold_466_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13698..16361)
DNA (2664bp) protein (888aa)
Alpha-L-rhamnosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q797_BIFDB
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ETO96027.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
alpha-L-rhamnosidase
L3_072_362G1_scaffold_466_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16431..17744)
DNA (1314bp) protein (438aa)
MFS-family sugar transporter n=4 Tax=Bifidobacterium dentium RepID=D2Q796_BIFDB
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO96045.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
MFS-family sugar transporter
L3_072_362G1_scaffold_466_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17963..19006
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9X8_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO96044.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L3_072_362G1_scaffold_466_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19010..20416)
DNA (1407bp) protein (469aa)
Symporter n=2 Tax=Bifidobacterium dentium RepID=D2Q794_BIFDB
MFS/sugar transport protein {ECO:0000313|EMBL:ETO95941.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
symporter
L3_072_362G1_scaffold_466_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20609..21655
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7V5_9BIFI
ApbE family protein {ECO:0000313|EMBL:ETO96040.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_362G1_scaffold_466_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21833..22972
DNA (1140bp) protein (380aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7V6_9BIFI
AAA ATPase domain protein {ECO:0000313|EMBL:ETO95976.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_362G1_scaffold_466_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23092..24930)
DNA (1839bp) protein (613aa)
ABC transporter permease (EC:3.6.3.44)
ABC-type transporter, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q791_BIFDB
ABC transporter transmembrane region {ECO:0000313|EMBL:ETO96008.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_466_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24932..26689)
DNA (1758bp) protein (586aa)
ABC transporter permease (EC:3.6.3.44)
ABC-type transporter, permease component n=2 Tax=Bifidobacterium dentium RepID=D2Q790_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO96048.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_466_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26997..27497)
DNA (501bp) protein (167aa)
MarR-type transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q789_BIFDB
Winged helix DNA-binding domain protein {ECO:0000313|EMBL:ETO95998.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
MarR family transcriptional regulator
L3_072_362G1_scaffold_466_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27661..28755)
DNA (1095bp) protein (365aa)
oxidoreductase in aldo-keto reductase family (EC:1.1.1.149)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7W0_9BIFI
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ETO95936.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_362G1_scaffold_466_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29551..29745
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=3 Tax=Bifidobacterium dentium RepID=B1S7W2_9BIFI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ETO96002.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thiS; thiamine biosynthesis protein ThiS
L3_072_362G1_scaffold_466_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29994..30707
DNA (714bp) protein (238aa)
Thiamine biosynthesis protein ThiF n=2 Tax=Bifidobacterium dentium RepID=E0Q9Y9_9BIFI
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:ETO95952.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thiF; thiamine biosynthesis protein ThiF
L3_072_362G1_scaffold_466_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30738..31652
DNA (915bp) protein (305aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Thiazole synthase n=5 Tax=root RepID=D2Q785_BIFDB
thiG; thiazole synthase ThiG
L3_072_362G1_scaffold_466_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31801..33402)
DNA (1602bp) protein (534aa)
Amino acid permease n=2 Tax=Bifidobacterium dentium RepID=E0Q9Z1_9BIFI
Amino acid permease {ECO:0000313|EMBL:EFM40766.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
amino acid permease
L3_072_362G1_scaffold_466_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33564..34136)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7W7_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26129.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_362G1_scaffold_466_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34463..34612)
DNA (150bp) protein (50aa)
Fimbrial subunit n=2 Tax=Bifidobacterium dentium RepID=D2Q782_BIFDB
fimbrial subunit
Fimbrial isopeptide formation D2 domain protein {ECO:0000313|EMBL:ETO95957.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 27 items

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