ggKbase home page

L3_072_362G1_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_468_1
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..171
DNA (171bp) protein (57aa)
ABC-2 transporter family protein n=1 Tax=Clostridium difficile F501 RepID=T4BFG0_CLODI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC87765.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_468_2
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(168..539)
DNA (372bp) protein (124aa)
Transcriptional regulator, BadM/Rrf2 family n=4 Tax=Bacteria RepID=C8WLK3_EGGLE
BadM/Rrf2 family transcriptional regulator
Putative HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EGC87933.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_468_3
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

800..1552
DNA (753bp) protein (251aa)
Transglycosylase n=3 Tax=Bacteria RepID=E5XBC5_9ACTN
Transglycosylase {ECO:0000313|EMBL:EGC87808.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
glycosyl transferase family protein
L3_072_362G1_scaffold_468_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1688..2488
DNA (801bp) protein (267aa)
Glycosyl hydrolases 25 family protein n=1 Tax=Clostridium difficile F501 RepID=T4BGQ9_CLODI
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:EQI08206.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
glycoside hydrolase
L3_072_362G1_scaffold_468_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2749..4068
DNA (1320bp) protein (440aa)
Major facilitator superfamily transporter n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XBC7_9ACTN
major facilitator superfamily protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EGC87828.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_468_6
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4169..4936)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Eggerthella RepID=C8WLK7_EGGLE
short-chain dehydrogenase/reductase SDR
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EGC87882.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_468_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5109..7259)
DNA (2151bp) protein (717aa)
UvrABC system protein B n=2 Tax=Bacteria RepID=E5XBC9_9ACTN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
excinuclease ABC subunit B
L3_072_362G1_scaffold_468_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7380..7736)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Eggerthella RepID=C8WLK9_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV56472.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_468_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7833..9119
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WLL0_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI72118.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L3_072_362G1_scaffold_468_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9380..9979)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Dephospho-CoA kinase n=3 Tax=Eggerthella RepID=C8WLL1_EGGLE
dephospho-CoA kinase
L3_072_362G1_scaffold_468_11
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9976..11034)
DNA (1059bp) protein (353aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Eggerthella sp. HGA1 RepID=F0HSD6_9ACTN
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
L3_072_362G1_scaffold_468_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11293..13218
DNA (1926bp) protein (642aa)
Acyltransferase 3 n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WLL3_EGGLE
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ACV56476.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_468_13
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13364..14680
DNA (1317bp) protein (439aa)
Xanthine/uracil/vitamin C permease n=3 Tax=Bacteria RepID=C8WLL4_EGGLE
xanthine/uracil/vitamin C permease
Putative permease {ECO:0000313|EMBL:EGC87763.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_468_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14789..16006)
DNA (1218bp) protein (406aa)
RNA binding S1 domain protein n=4 Tax=Bacteria RepID=C8WLL5_EGGLE
RNA binding S1 domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KGI72113.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_072_362G1_scaffold_468_15
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16263..16679)
DNA (417bp) protein (139aa)
Ferric uptake regulator family protein n=3 Tax=Bacteria RepID=E5XBD7_9ACTN
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EGC87916.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Fur family ferric uptake regulator
L3_072_362G1_scaffold_468_16
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16998..17336)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=3 Tax=Bacteria RepID=E5XBD8_9ACTN
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KGI72111.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
nitrogen regulatory protein P-II
L3_072_362G1_scaffold_468_17
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17352..18626)
DNA (1275bp) protein (425aa)
Ammonium transporter n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XBD9_9ACTN
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
ammonium transporter
L3_072_362G1_scaffold_468_18
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18813..19328
DNA (516bp) protein (172aa)
Acetyltransferase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XBE0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72109.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
N-acetyltransferase GCN5
L3_072_362G1_scaffold_468_19
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19797..19970
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=2 Tax=Eggerthella RepID=E5XBE1_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC87773.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_072_362G1_scaffold_468_20
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20046..21098)
DNA (1053bp) protein (351aa)
Phosphate transporter n=2 Tax=Eggerthella RepID=E5XBE2_9ACTN
Phosphate transporter family protein {ECO:0000313|EMBL:EGC87975.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
phosphate transporter
L3_072_362G1_scaffold_468_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21298..23175)
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Bacteria RepID=E5XBE3_9ACTN
deoxyxylulose-5-phosphate synthase
L3_072_362G1_scaffold_468_22
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23195..23455)
DNA (261bp) protein (87aa)
Exonuclease VII small subunit n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XBE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72105.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Exonuclease VII small subunit
L3_072_362G1_scaffold_468_23
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23445..24047)
DNA (603bp) protein (201aa)
N utilization substance protein B homolog n=2 Tax=Bacteria RepID=E5XBE5_9ACTN
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
NusB antitermination factor
L3_072_362G1_scaffold_468_24
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24073..24420)
DNA (348bp) protein (116aa)
Peroxidase/catalase n=2 Tax=Eggerthella RepID=E5XBE6_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC87745.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_072_362G1_scaffold_468_25
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24417..25769)
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase n=2 Tax=Eggerthella RepID=E5XBE7_9ACTN
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:KGI72102.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
acetyl-CoA carboxylase, biotin carboxylase
L3_072_362G1_scaffold_468_26
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25769..27658)
DNA (1890bp) protein (630aa)
Acetyl-CoA carboxylase n=2 Tax=Bacteria RepID=E5XBE8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72101.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_072_362G1_scaffold_468_27
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27884..28198
DNA (315bp) protein (105aa)
Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WLN5_EGGLE
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV56498.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_468_28
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28267..28827)
DNA (561bp) protein (187aa)
Elongation factor P n=4 Tax=Bacteria RepID=C8WLN6_EGGLE
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_468_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28961..30130
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HR95_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EQI03539.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_072_362G1_scaffold_468_30
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30203..31369)
DNA (1167bp) protein (389aa)
Peptidase M24 n=3 Tax=Bacteria RepID=C8WLN8_EGGLE
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ACV56501.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Displaying items 1-30 of 34 in total

View Taxonomy