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L3_072_362G1_scaffold_483

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_483_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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319..942
DNA (624bp) protein (208aa)
CBS domain containing protein n=31 Tax=Lactobacillus casei group RepID=D8GBS2_LACCZ
CBS domain protein
CBS domain containing protein {ECO:0000313|EMBL:ABJ71079.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L3_072_362G1_scaffold_483_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1101..3734
DNA (2634bp) protein (878aa)
Pyruvate,phosphate dikinase n=3 Tax=Lactobacillus casei group RepID=S4ZQL6_LACCA
Pyruvate,phosphate dikinase {ECO:0000313|EMBL:AGP69249.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Pyruvate,phosphate dikinase
L3_072_362G1_scaffold_483_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3891..5945)
DNA (2055bp) protein (685aa)
Probable potassium transport system protein kup n=17 Tax=Lactobacillus casei group RepID=KUP_LACCB
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
KUP family potassium uptake permease
L3_072_362G1_scaffold_483_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6107..6985)
DNA (879bp) protein (293aa)
ATP-binding component of an ABC superfamily transporter (EC:3.6.1.3)
ABC-type multidrug transport system n=23 Tax=Lactobacillus casei group RepID=C5F965_LACPA
Putative multidrug ABC transporter ATP-binding component {ECO:0000313|EMBL:BAN72558.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L3_072_362G1_scaffold_483_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7048..8244)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=6 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6C716_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EEI68706.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
hypothetical protein
L3_072_362G1_scaffold_483_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8241..9338)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp126 RepID=S2RAL2_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC74324.1}; TaxID=1256206 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp126.;"
hypothetical protein
L3_072_362G1_scaffold_483_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9566..10912)
DNA (1347bp) protein (449aa)
Aminopeptidase C {ECO:0000313|EMBL:EPC37084.1}; EC=3.4.22.40 {ECO:0000313|EMBL:EPC37084.1};; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Aminopeptidase C n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2N8I4_LACPA
hypothetical protein
L3_072_362G1_scaffold_483_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11235..12554)
DNA (1320bp) protein (440aa)
Aminopeptidase C {ECO:0000313|EMBL:EPC37085.1}; EC=3.4.22.40 {ECO:0000313|EMBL:EPC37085.1};; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Aminopeptidase C n=4 Tax=Lactobacillus casei group RepID=K6RY56_LACCA
Aminopeptidase C
L3_072_362G1_scaffold_483_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12799..13176
DNA (378bp) protein (126aa)
Uncharacterized protein n=48 Tax=Lactobacillus casei group RepID=C5F959_LACPA
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:EKP97886.1}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
L3_072_362G1_scaffold_483_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13291..13581)
DNA (291bp) protein (97aa)
Acetyltransferase n=45 Tax=Lactobacillus casei group RepID=B3WA58_LACCB
yjdJ; hypothetical protein
Acetyltransferase {ECO:0000313|EMBL:GAN35573.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_483_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13802..14344
DNA (543bp) protein (181aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EKQ08878.1}; EC=3.-.-.- {ECO:0000313|EMBL:EKQ08878.1};; EC=3.6.1.23 {ECO:0000313|EMBL:EKQ08878.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=54 Tax=Lactobacillus casei group RepID=K0MXG3_LACCA
Deoxyuridine 5'-triphosphate nucleotidohydrolase
L3_072_362G1_scaffold_483_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14361..15725
DNA (1365bp) protein (455aa)
DNA repair protein radA n=6 Tax=Lactobacillus casei group RepID=K6QPT3_LACCA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1256211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4649.;"
ATP-dependent serine protease
L3_072_362G1_scaffold_483_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15747..16862
DNA (1116bp) protein (372aa)
Integral membrane protein, PIN and TRAM domains n=41 Tax=Lactobacillus casei group RepID=B3WA55_LACCB
pili retraction protein pilT
Integral membrane protein, PIN and TRAM domains {ECO:0000313|EMBL:GAN35576.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_362G1_scaffold_483_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16966..17862)
DNA (897bp) protein (299aa)
Transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein n=5 Tax=Lactobacillus casei group RepID=S2QXE8_LACPA
Transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein {ECO:0000313|EMBL:EPC87609.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein
L3_072_362G1_scaffold_483_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18143..19048
DNA (906bp) protein (302aa)
ATP-binding component of an ABC superfamily transporter (EC:3.6.1.3)
Multidrug ABC transporter ATPase n=4 Tax=Lactobacillus casei group RepID=S2Q0J7_LACPA
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EPC59442.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L3_072_362G1_scaffold_483_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19052..19828
DNA (777bp) protein (259aa)
Permease component of an ABC superfamily transporter n=5 Tax=Lactobacillus casei group RepID=K6RI13_LACCA
Sugar ABC transporter ATPase {ECO:0000313|EMBL:EPC87607.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Hypothetical protein
L3_072_362G1_scaffold_483_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20234..22129
DNA (1896bp) protein (632aa)
ABC transporter {ECO:0000313|EMBL:EKQ15276.1}; EC=3.4.-.- {ECO:0000313|EMBL:EKQ15276.1};; EC=3.6.1.3 {ECO:0000313|EMBL:EKQ15276.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
ABC transporter n=1 Tax=Lactobacillus casei A2-362 RepID=K6R3H2_LACCA
Bacteriocin ABC-transporter, ATP-binding and permease component
L3_072_362G1_scaffold_483_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22538..23836
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=K0NAB9_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK23405.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L3_072_362G1_scaffold_483_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24001..24375
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2P192_LACPA
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EPC37093.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
GntR family transcriptional regulator
L3_072_362G1_scaffold_483_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24382..25398
DNA (1017bp) protein (339aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=S2RYQ3_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC87603.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Hypothetical protein
L3_072_362G1_scaffold_483_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25411..26250
DNA (840bp) protein (280aa)
Uncharacterized protein n=10 Tax=Lactobacillus casei group RepID=S6BLY2_LACPA
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ19874.1}; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
L3_072_362G1_scaffold_483_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26396..27226)
DNA (831bp) protein (277aa)
RpiR family transcriptional regulator n=1 Tax=Lactobacillus casei 32G RepID=K6QLC6_LACCA
RpiR family transcriptional regulator {ECO:0000313|EMBL:EKP97876.1}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
hypothetical protein
L3_072_362G1_scaffold_483_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27410..28081
DNA (672bp) protein (224aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Ribose 5-phosphate isomerase A n=2 Tax=Lactobacillus casei group RepID=S4ZPH6_LACCA
Ribose 5-phosphate isomerase A
L3_072_362G1_scaffold_483_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28197..29177
DNA (981bp) protein (327aa)
Dehydrogenase n=10 Tax=Lactobacillus casei group RepID=K0NAB4_LACCA
Oxidoreductase family, NAD-binding Rossmann fold domain protein
Dehydrogenase {ECO:0000313|EMBL:EPC91769.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_362G1_scaffold_483_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29325..30818
DNA (1494bp) protein (498aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Glutamate--tRNA ligase n=46 Tax=Lactobacillus casei group RepID=SYE_LACC3
gltX; glutamyl-tRNA synthetase
L3_072_362G1_scaffold_483_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31052..31159
DNA (108bp) protein (36aa)
Uncharacterized protein n=30 Tax=Lactobacillus casei group RepID=D8GBP7_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC91767.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_362G1_scaffold_483_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31485..32072
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp230 RepID=S2L7A6_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EKP97871.1}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
hypothetical protein
L3_072_362G1_scaffold_483_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32198..33592
DNA (1395bp) protein (465aa)
GlcD family glycolate dehydrogenase subunit {ECO:0000313|EMBL:EKQ08475.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ08475.1};; EC=1.1.99.14 {ECO:0000313|EMBL:EKQ08475.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
GlcD family glycolate dehydrogenase subunit n=9 Tax=Lactobacillus casei group RepID=K6QY64_LACCA
glycolate oxidase subunit (GlcD)
Displaying 28 items

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