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L3_072_362G1_scaffold_504

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_504_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Clostridium difficile F501 RepID=T4C4A9_CLODI
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EQI14923.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
FMN-binding domain-containing protein
L3_072_362G1_scaffold_504_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(373..1593)
DNA (1221bp) protein (407aa)
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EQI14921.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EQI14921.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase n=1 Tax=Clostridium difficile F501 RepID=T4C106_CLODI
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L3_072_362G1_scaffold_504_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1586..2617)
DNA (1032bp) protein (344aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ferrochelatase n=2 Tax=Bacteria RepID=T4C0D9_CLODI
ferrochelatase
L3_072_362G1_scaffold_504_4
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2712..3527
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=C8WHD7_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV55528.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_504_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3529..4563)
DNA (1035bp) protein (345aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Pseudouridine synthase n=3 Tax=Bacteria RepID=E5XC38_9ACTN
RluA family pseudouridine synthase
L3_072_362G1_scaffold_504_6
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4560..5303)
DNA (744bp) protein (248aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Lipoprotein signal peptidase n=2 Tax=Eggerthella RepID=E5XC37_9ACTN
lipoprotein signal peptidase
L3_072_362G1_scaffold_504_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5266..8112)
DNA (2847bp) protein (949aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Isoleucine--tRNA ligase n=2 Tax=Bacteria RepID=E5XC36_9ACTN
isoleucyl-tRNA synthetase
L3_072_362G1_scaffold_504_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8328..9206
DNA (879bp) protein (293aa)
DegV family protein n=4 Tax=Bacteria RepID=C8WHD3_EGGLE
degV family protein
DegV family protein {ECO:0000313|EMBL:ACV55524.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_504_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9416..10804)
DNA (1389bp) protein (463aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
DNA polymerase IV n=1 Tax=Clostridium difficile F501 RepID=T4BEE6_CLODI
DNA-directed DNA polymerase
L3_072_362G1_scaffold_504_10
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10848..11984
DNA (1137bp) protein (379aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EGC89070.1}; EC=2.6.1.- {ECO:0000313|EMBL:EGC89070.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Aminotransferase, class I/II n=4 Tax=Bacteria RepID=F0HNI2_9ACTN
class I and II aminotransferase
L3_072_362G1_scaffold_504_11
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12037..14616)
DNA (2580bp) protein (860aa)
Heavy metal translocating P-type ATPase n=2 Tax=Eggerthella RepID=C8WHD0_EGGLE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACV55521.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
heavy metal translocating P-type ATPase
L3_072_362G1_scaffold_504_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14716..15066)
DNA (351bp) protein (117aa)
Metal-sensitive transcriptional repressor family protein n=1 Tax=Clostridium difficile F501 RepID=T4BP15_CLODI
Metal-sensitive transcriptional repressor family protein {ECO:0000313|EMBL:EQI11692.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_072_362G1_scaffold_504_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15366..16142
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BUV5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI11693.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_072_362G1_scaffold_504_14
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16526..17473)
DNA (948bp) protein (316aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WHC7_EGGLE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGC89316.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17478..18413)
DNA (936bp) protein (312aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Clostridium difficile F501 RepID=T4B2L5_CLODI
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQI03715.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
AraC family transcriptional regulator
L3_072_362G1_scaffold_504_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18621..19412)
DNA (792bp) protein (264aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Eggerthella RepID=C8WHC4_EGGLE
4Fe-4S ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EGC89290.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19539..19940
DNA (402bp) protein (134aa)
Bacterial regulatory , arsR family protein n=1 Tax=Clostridium difficile F501 RepID=T4B7C6_CLODI
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EQI03723.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
ArsR family transcriptional regulator
L3_072_362G1_scaffold_504_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20027..20245
DNA (219bp) protein (73aa)
Heavy-metal-associated domain protein n=1 Tax=Clostridium difficile F501 RepID=T4B4B7_CLODI
Heavy-metal-associated domain protein {ECO:0000313|EMBL:EQI03721.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
heavy metal transport/detoxification protein
L3_072_362G1_scaffold_504_19
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20345..22267
DNA (1923bp) protein (641aa)
Heavy metal translocating P-type ATPase n=3 Tax=Eggerthella RepID=C8WHC1_EGGLE
Cadmium-exporting ATPase {ECO:0000313|EMBL:EGC89296.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
heavy metal translocating P-type ATPase
L3_072_362G1_scaffold_504_20
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22537..22947
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C8WHC0_EGGLE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGC89287.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_072_362G1_scaffold_504_21
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23094..23393
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WHB9_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC89336.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_22
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23540..23785
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WHB8_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC89306.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_23
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23886..24368
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WHB7_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI72849.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_072_362G1_scaffold_504_24
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24378..24593
DNA (216bp) protein (72aa)
Transcriptional regulator, XRE family n=3 Tax=Eggerthella RepID=C8WHB6_EGGLE
XRE family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGI72850.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_072_362G1_scaffold_504_25
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24662..25333
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=3 Tax=Eggerthella RepID=C8WHB5_EGGLE
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV55506.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_072_362G1_scaffold_504_26
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25335..26339
DNA (1005bp) protein (335aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Histidine kinase n=2 Tax=Eggerthella RepID=C8WHB4_EGGLE
histidine kinase
L3_072_362G1_scaffold_504_27
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26461..27141
DNA (681bp) protein (227aa)
ABC transporter related n=3 Tax=Eggerthella RepID=C8WHB3_EGGLE
ABC transporter-like protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGC89261.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_28
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27141..30044
DNA (2904bp) protein (968aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WHB2_EGGLE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGC89274.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_072_362G1_scaffold_504_29
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30098..31087)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Eggerthella RepID=C8WHB1_EGGLE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGC89303.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_072_362G1_scaffold_504_30
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31074..31436)
DNA (363bp) protein (121aa)
Transcriptional regulator, PadR-like family n=3 Tax=Eggerthella RepID=C8WHB0_EGGLE
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACV55501.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Displaying items 1-30 of 32 in total

View Taxonomy