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L3_072_362G1_scaffold_505

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_505_1
unknown

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794..928
DNA (135bp) protein (45aa)

This feature has no annotations

L3_072_362G1_scaffold_505_2
unknown

Not on your lists

comp(1090..1290)
DNA (201bp) protein (67aa)

This feature has no annotations

L3_072_362G1_scaffold_505_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1674..2744
DNA (1071bp) protein (357aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSY4_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EKQ50346.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
stage II sporulation P family protein
L3_072_362G1_scaffold_505_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2888..3229
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LRM8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG97528.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_072_362G1_scaffold_505_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3609..5414
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRN3_CLOSA
L3_072_362G1_scaffold_505_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5572..6015
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1H8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97988.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_072_362G1_scaffold_505_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6163..7290
DNA (1128bp) protein (376aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1H9_9CLOT
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EHI97989.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L3_072_362G1_scaffold_505_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7488..8516
DNA (1029bp) protein (343aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNC2_CLOSA
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8559..9161
DNA (603bp) protein (201aa)
Protein GrpE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQZ1_CLOSA
grpE; protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9230..11068
DNA (1839bp) protein (613aa)
Chaperone protein DnaK n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1I2_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
dnaK4; chaperone protein DnaK
L3_072_362G1_scaffold_505_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11336..12472
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=3 Tax=Clostridium butyricum RepID=B1QX13_CLOBU
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
chaperone protein DnaJ
L3_072_362G1_scaffold_505_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12554..12973)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AF38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87707.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
viral A-type inclusion protein repeat
L3_072_362G1_scaffold_505_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13235..14782
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4L4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31413.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferredoxin-nitrite reductase
L3_072_362G1_scaffold_505_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14968..15672
DNA (705bp) protein (235aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB (EC:2.1.1.33)
UPI0003D60C7E related cluster n=1 Tax=unknown RepID=UPI0003D60C7E
L3_072_362G1_scaffold_505_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16237..17181
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium RepID=PRMA_CLOB8
prmA; 50S ribosomal protein L11 methyltransferase
L3_072_362G1_scaffold_505_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17202..17963
DNA (762bp) protein (254aa)
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRP2_CLOSA
L3_072_362G1_scaffold_505_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17970..19343
DNA (1374bp) protein (458aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW84_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EKQ50333.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
MiaB-like tRNA modifying protein
L3_072_362G1_scaffold_505_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19735..20079
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MIL7_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGF54701.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_362G1_scaffold_505_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20217..20393
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=A6LRP2_CLOB8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_362G1_scaffold_505_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20423..20875
DNA (453bp) protein (151aa)
GatB/YqeY domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCF9_9CLOT
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:EHI98071.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_072_362G1_scaffold_505_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21298..21576
DNA (279bp) protein (93aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCG0_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EHI98072.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_072_362G1_scaffold_505_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21582..22712
DNA (1131bp) protein (377aa)
Sporulation protein YqfD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL2_CLOSA
yqfD; sporulation protein YqfD
Sporulation protein YqfD {ECO:0000313|EMBL:AGX42103.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22745..24880
DNA (2136bp) protein (712aa)
Putative domain HDIG-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMS3_CLOSA
putative domain HDIG-containing protein
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGX42104.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24883..25383
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Endoribonuclease YbeY n=2 Tax=Clostridium RepID=YBEY_CLOB8
metalloprotease
L3_072_362G1_scaffold_505_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25503..26204
DNA (702bp) protein (234aa)
Diacylglycerol kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR06_CLOSA
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:AGX42106.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26627..27517
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M9S9_9CLOT
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_362G1_scaffold_505_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27520..28899
DNA (1380bp) protein (460aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW78_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
recO; DNA repair protein RecO
L3_072_362G1_scaffold_505_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29101..29739
DNA (639bp) protein (213aa)
Transcriptional repressor CcpN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNE2_CLOSA
ccpN; transcriptional repressor CcpN
Transcriptional repressor CcpN {ECO:0000313|EMBL:AGX42110.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_362G1_scaffold_505_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29834..32461
DNA (2628bp) protein (876aa)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGX5_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKQ50320.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pyruvate phosphate dikinase
Displaying 29 items

View Taxonomy