ggKbase home page

L3_072_362G1_scaffold_515

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_515_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

429..1286
DNA (858bp) protein (286aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Formyltetrahydrofolate deformylase n=7 Tax=Bacteroides RepID=A7V9X3_BACUN
formyltetrahydrofolate deformylase
L3_072_362G1_scaffold_515_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1376..1966
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Bacteroides sp. D20 RepID=D2F0J5_9BACE
L3_072_362G1_scaffold_515_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1987..2709
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteroides RepID=A7V9X1_BACUN
L3_072_362G1_scaffold_515_4
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2759..3514
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Bacteroides RepID=A7V9X0_BACUN
L3_072_362G1_scaffold_515_5
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3636..4241
DNA (606bp) protein (202aa)
phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=2 Tax=Bacteroides RepID=A7V9W9_BACUN
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_072_362G1_scaffold_515_6
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4265..4972
DNA (708bp) protein (236aa)
ABC transporter, ATP-binding protein n=6 Tax=root RepID=A7V9W8_BACUN
ABC transporter {ECO:0000313|EMBL:EFV25283.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ABC transporter related protein
L3_072_362G1_scaffold_515_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5096..6415
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=7 Tax=Bacteroides RepID=A7V9W7_BACUN
L3_072_362G1_scaffold_515_8
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6331..6492)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9A4N2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01816.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_362G1_scaffold_515_9
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6569..7729
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=6 Tax=Bacteroides RepID=A7V9W6_BACUN
L3_072_362G1_scaffold_515_10
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7872..8354
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ferroxidase (EC:1.16.3.1)
Ferritin n=6 Tax=Bacteroides RepID=A7V9W5_BACUN
L3_072_362G1_scaffold_515_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8496..9683)
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
Glycine C-acetyltransferase n=4 Tax=Bacteroides RepID=A7V9W4_BACUN
L3_072_362G1_scaffold_515_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9837..10793
DNA (957bp) protein (319aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
NAD dependent epimerase/dehydratase family protein n=6 Tax=Bacteroides RepID=A7V9W2_BACUN
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KDS50449.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_072_362G1_scaffold_515_13
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10814..11662
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V9W0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01823.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_362G1_scaffold_515_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11679..12665
DNA (987bp) protein (329aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Bacteroides RepID=A7V9V9_BACUN
L3_072_362G1_scaffold_515_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12736..13503
DNA (768bp) protein (256aa)
Metallo-beta-lactamase superfamily protein n=6 Tax=Bacteroides RepID=E5VCX8_9BACE
PhnP protein {ECO:0000313|EMBL:EOS05729.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hydrolase
L3_072_362G1_scaffold_515_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13576..15210
DNA (1635bp) protein (545aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V9V7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV25326.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_072_362G1_scaffold_515_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15378..15746)
DNA (369bp) protein (123aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V9V6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV25325.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_072_362G1_scaffold_515_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15934..17058
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=5 Tax=Bacteroides RepID=A7V9V4_BACUN
L3_072_362G1_scaffold_515_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17197..17967
DNA (771bp) protein (257aa)
Exonuclease n=7 Tax=Bacteroides RepID=A7V9V3_BACUN
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOS05733.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Exonuclease RNase T and DNA polymerase III
L3_072_362G1_scaffold_515_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17968..19197
DNA (1230bp) protein (410aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFA19680.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFA19680.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFA19680.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=3 Tax=Bacteroides RepID=D2F0L2_9BACE
L3_072_362G1_scaffold_515_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19224..20894
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=2 Tax=Bacteroides RepID=A7V9V1_BACUN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
DNA replication and repair protein RecN
L3_072_362G1_scaffold_515_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20923..21663
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteroides RepID=A7V9V0_BACUN
RNA methyltransferase {ECO:0000313|EMBL:EFV25320.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
RNA methyltransferase, TrmH family, group 3
L3_072_362G1_scaffold_515_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21667..23370
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP04_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05737.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_072_362G1_scaffold_515_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23597..23971
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bacteroides uniformis RepID=I9J5M5_BACUN
TdcF protein {ECO:0000313|EMBL:EOS05738.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
endoribonuclease L-PSP
L3_072_362G1_scaffold_515_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23939..25192)
DNA (1254bp) protein (418aa)
FolC bifunctional protein (EC:6.3.2.17)
FolC protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HPD5_BACUN
FolC protein {ECO:0000313|EMBL:EOS05739.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L3_072_362G1_scaffold_515_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25361..26686
DNA (1326bp) protein (442aa)
PhoH family protein n=2 Tax=Bacteroides uniformis RepID=A7V9U4_BACUN
PhoH family protein {ECO:0000313|EMBL:EDO51821.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
PhoH family protein
L3_072_362G1_scaffold_515_27
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26871..28775
DNA (1905bp) protein (635aa)
Polysaccharide biosynthesis protein n=3 Tax=Bacteroides RepID=A7V9U3_BACUN
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFV25315.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
polysaccharide biosynthesis protein CapD
L3_072_362G1_scaffold_515_28
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28870..29847)
DNA (978bp) protein (326aa)
Dihydroorotate dehydrogenase (Fumarate) n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP08_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01843.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
dihydroorotate oxidase
L3_072_362G1_scaffold_515_29
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29866..30531)
DNA (666bp) protein (222aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGN9_9BACE
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:CDE01845.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
alanine racemase
L3_072_362G1_scaffold_515_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30611..31075)
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V9U0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82319.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy