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L3_072_362G1_scaffold_614

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_614_1
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18..1631
DNA (1614bp) protein (538aa)
Resolvase, N terminal domain protein n=2 Tax=Clostridium difficile RepID=T4Q0T6_CLODI
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDP11815.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
resolvase family site-specific recombinase
L3_072_362G1_scaffold_614_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1756..2640
DNA (885bp) protein (295aa)
Helix-turn-helix family protein n=156 Tax=Clostridium difficile RepID=T3IGQ0_CLODC
Transcriptional regulator, HTH-type
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CAJ67114.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_362G1_scaffold_614_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2645..2845
DNA (201bp) protein (67aa)
Phospholipase D/nuclease family protein n=201 Tax=Clostridium difficile RepID=T3ILT5_CLODC
uncharacterised protein
Phospholipase D/nuclease family protein {ECO:0000313|EMBL:EQE70269.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_614_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2842..3762
DNA (921bp) protein (307aa)
ABC-type transportsystem,bacitracin/multidrug-family ATP-binding protein (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=10 Tax=Clostridium difficile RepID=G6BSZ7_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQE70210.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_614_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3759..4517
DNA (759bp) protein (253aa)
ABC-2 transporter family protein n=24 Tax=Clostridium difficile RepID=T2X9W7_CLODI
ABC-type transport system,bacitracin/multidrug-family permease {ECO:0000313|EMBL:CCL22475.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transportsystem,bacitracin/multidrug-family permease
L3_072_362G1_scaffold_614_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4765..5838
DNA (1074bp) protein (358aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium difficile RepID=T4Q0U3_CLODI
iron-sulfur-binding protein
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQE70231.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_614_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5908..6171
DNA (264bp) protein (88aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=C9XJ71_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK99343.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_072_362G1_scaffold_614_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6377..7354
DNA (978bp) protein (326aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Biotin synthase n=127 Tax=Clostridium difficile RepID=BIOB_CLOD6
L3_072_362G1_scaffold_614_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7574..8596
DNA (1023bp) protein (341aa)
Sugar-binding domain protein n=2 Tax=Clostridium difficile RepID=G6BSZ2_CLODI
Sugar-binding domain protein {ECO:0000313|EMBL:EHJ34597.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
rbsR; ribose operon repressor
L3_072_362G1_scaffold_614_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8638..9528
DNA (891bp) protein (297aa)
Ribokinase {ECO:0000313|EMBL:EQE70204.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EQE70204.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
rbsK; Ribokinase, pfkB family (EC:2.7.1.15)
Ribokinase n=137 Tax=Clostridium difficile RepID=G6BSZ1_CLODI
L3_072_362G1_scaffold_614_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9576..10538
DNA (963bp) protein (321aa)
D-ribose ABC transporter, substrate-binding protein n=176 Tax=Clostridium difficile RepID=C9XJ75_CLODC
D-ribose ABC transporter substrate-binding protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:EQE70184.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_614_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10592..12103
DNA (1512bp) protein (504aa)
rbsA; ABC-type transport system, ribose-specificATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ribose-specific ATP-binding protein {ECO:0000313|EMBL:CAJ67123.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ67123.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=2 Tax=Clostridium difficile RepID=T4Q1W9_CLODI
L3_072_362G1_scaffold_614_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12087..13085
DNA (999bp) protein (333aa)
Ribose ABC transporter, permease protein n=106 Tax=Clostridium difficile RepID=C9XJ77_CLODC
ribose ABC transporter, permease protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:EQE70271.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_362G1_scaffold_614_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13269..14531
DNA (1263bp) protein (421aa)
Peptidase, ArgE/DapE family protein n=11 Tax=Clostridium difficile RepID=T3EQH7_CLODI
acetylornithine deacetylase
Putative acetylornithine deacetylase {ECO:0000313|EMBL:CBE01991.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_362G1_scaffold_614_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14551..15294
DNA (744bp) protein (248aa)
Uncharacterized protein n=144 Tax=Clostridium difficile RepID=C9XJ79_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE01993.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_362G1_scaffold_614_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15467..16852
DNA (1386bp) protein (462aa)
putative glutamate carboxypeptidase (EC:3.5.1.-)
Aminobenzoyl-glutamate utilization protein {ECO:0000313|EMBL:CKH75129.1}; Putative glutamate carboxypeptidase {ECO:0000313|EMBL:CEJ96821.1}; EC=3.5.1.- {ECO:0000313|EMBL:CEJ96821.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Amidohydrolase family protein n=2 Tax=Clostridium difficile RepID=T4ZMG2_CLODI
L3_072_362G1_scaffold_614_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17413..17553
DNA (141bp) protein (47aa)
Uncharacterized protein n=38 Tax=Clostridium difficile RepID=U4A549_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG78636.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_614_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17783..18229)
DNA (447bp) protein (149aa)
Acetyltransferase family protein n=37 Tax=Clostridium difficile RepID=T2UJZ5_CLODI
Acetyltransferase family protein {ECO:0000313|EMBL:EQI94127.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
acetyltransferase
L3_072_362G1_scaffold_614_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18927..19838
DNA (912bp) protein (304aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=C9XJ83_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30055.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_362G1_scaffold_614_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19828..20271
DNA (444bp) protein (148aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6B2I2_CLODI
hypothetical protein
Putative 'four-disulfide core' protein {ECO:0000313|EMBL:EQG78648.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_362G1_scaffold_614_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20282..20773
DNA (492bp) protein (164aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=G6BSY2_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDS83478.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_072_362G1_scaffold_614_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20975..21703)
DNA (729bp) protein (243aa)
Putative hydrolase, HAD superfamily, subfamily IB {ECO:0000313|EMBL:CCK99356.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCK99356.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
HAD phosphoserine phosphatase-like hydrolase, IB family protein n=221 Tax=Clostridium difficile RepID=C9XJ86_CLODC
phosphoserine phosphatase
L3_072_362G1_scaffold_614_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21828..22916
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4Q0Z9_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34585.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_362G1_scaffold_614_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23353..24201)
DNA (849bp) protein (283aa)
Uncharacterized protein n=16 Tax=Clostridium difficile RepID=T2UIF8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG78744.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative spore coat assembly asparagine-richprotein
L3_072_362G1_scaffold_614_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24400..24765
DNA (366bp) protein (122aa)
ArsR-family transcriptional regulator n=208 Tax=Clostridium difficile RepID=C9XJ89_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCL30195.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_362G1_scaffold_614_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24788..27175
DNA (2388bp) protein (796aa)
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EQG78619.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EQG78619.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transportingP-type ATPase (EC:3.6.3.5)
Cadmium-translocating P-type ATPase n=2 Tax=Clostridium difficile RepID=T4Q0W4_CLODI
Displaying 26 items

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