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L3_072_362G1_scaffold_626

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_626_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..382
DNA (381bp) protein (127aa)
60 kDa chaperonin n=1 Tax=Bifidobacterium breve RepID=Q5YBW3_BIFBR
60 kDa chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_072_362G1_scaffold_626_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(565..855)
DNA (291bp) protein (97aa)
WXG100 family type VII secretion target n=4 Tax=Bifidobacterium breve RepID=F6C7W9_BIFBA
Hypothetical protein with DUF909 domain
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

932..1768
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L249_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75699.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_072_362G1_scaffold_626_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1761..2492
DNA (732bp) protein (244aa)
Response regulator receiver domain protein n=5 Tax=Bifidobacterium breve RepID=F6C7X1_BIFBA
Two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:AHJ21528.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2503..4494
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Histidine kinase sensor of two-component system n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZ70_BIFBR
Two component system histidine kinase
L3_072_362G1_scaffold_626_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4588..4977
DNA (390bp) protein (130aa)
Cold shock protein n=4 Tax=Bifidobacterium breve RepID=F9Y270_BIFBU
Cold shock protein
Cold shock protein {ECO:0000313|EMBL:AHJ19729.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_072_362G1_scaffold_626_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4986..6035
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7X4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21525.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6187..7152)
DNA (966bp) protein (322aa)
Universal stress protein family n=5 Tax=Bifidobacterium breve RepID=F9Y268_BIFBU
Universal stress protein family
Universal stress family protein {ECO:0000313|EMBL:AEF27464.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_362G1_scaffold_626_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7305..9914
DNA (2610bp) protein (870aa)
Negative regulator of genetic competence clpC/mecB n=5 Tax=Bifidobacterium breve RepID=F9Y267_BIFBU
Negative regulator of genetic competence clpC/mecB {ECO:0000313|EMBL:AHJ21523.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
clpC; Negative regulator of genetic competence clpC/mecB
L3_072_362G1_scaffold_626_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10071..11393)
DNA (1323bp) protein (441aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRG6_BIFBR
Cytosine deaminase
Cytosine deaminase {ECO:0000313|EMBL:AHJ21522.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11536..13038
DNA (1503bp) protein (501aa)
Purine catabolism regulatory protein-like family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRG7_BIFBR
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EFE88812.1}; Putative transcriptional regulator {ECO:0000313|EMBL:BAR00449.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Transcriptional regulator
L3_072_362G1_scaffold_626_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13012..13191)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRG8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88813.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L3_072_362G1_scaffold_626_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13226..14602
DNA (1377bp) protein (459aa)
Proline/betaine transporter n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y264_BIFBU
Proline/betaine transporter
Proline/betaine transporter {ECO:0000313|EMBL:AHJ21520.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14710..15468
DNA (759bp) protein (253aa)
Creatininase (EC:3.5.2.10)
Creatininase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y263_BIFBU
Creatininase {ECO:0000313|EMBL:AHJ21519.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15557..17341
DNA (1785bp) protein (595aa)
Calcineurin-like phosphoesterase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y262_BIFBU
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:ABE96024.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Calcineurin-like phosphoesterase
L3_072_362G1_scaffold_626_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17504..18949)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG49_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75688.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein with DUF349 domain
L3_072_362G1_scaffold_626_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18977..20440
DNA (1464bp) protein (488aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Histidine--tRNA ligase n=4 Tax=Bifidobacterium breve RepID=F6C857_BIFBA
Histidyl-tRNA synthetase
L3_072_362G1_scaffold_626_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20476..22275
DNA (1800bp) protein (600aa)
Aspartate--tRNA ligase n=6 Tax=Bifidobacterium breve RepID=F6C858_BIFBA
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHJ21515.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_362G1_scaffold_626_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22479..23030
DNA (552bp) protein (184aa)
YbaK/proline--tRNA ligase associated domain protein n=5 Tax=Bifidobacterium breve RepID=F6C859_BIFBA
Hypothetical protein with YbaK / prolyl-tRNA synthetases associated domain
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:AEF28109.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_362G1_scaffold_626_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23062..23925
DNA (864bp) protein (288aa)
Glutamate transport ATP-binding protein GluA n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AH82_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE88822.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glutamate transport ATP-binding protein gluA
L3_072_362G1_scaffold_626_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23983..24783
DNA (801bp) protein (267aa)
ABC transporter, substrate-binding protein, family 3 n=3 Tax=Bifidobacterium breve RepID=F6C861_BIFBA
Glutamate-binding protein gluB
Glutamate ABC transporter substrate binding component {ECO:0000313|EMBL:BAR00439.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_072_362G1_scaffold_626_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24783..25460
DNA (678bp) protein (226aa)
Glutamate transport system permease protein gluC n=5 Tax=Bifidobacterium breve RepID=F9Y255_BIFBU
Glutamate transport system permease protein gluC
Glutamate transport system permease protein gluC {ECO:0000313|EMBL:ABE96017.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_072_362G1_scaffold_626_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25466..26566
DNA (1101bp) protein (367aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C863_BIFBA
Glutamate transport system permease protein gluD
ABC transporter, permease protein {ECO:0000313|EMBL:AEF26715.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_362G1_scaffold_626_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26662..27342
DNA (681bp) protein (227aa)
PAP2 family protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C864_BIFBA
PAP2 domain protein
PAP2 family protein {ECO:0000313|EMBL:AEF26452.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Displaying 24 items

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