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L3_072_362G1_scaffold_444

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_444_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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362..1225
DNA (864bp) protein (288aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GYW3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EJF38325.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Response regulator receiver protein
L3_072_362G1_scaffold_444_2
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1231..1677
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI000370D24E
Chemotaxis protein CheX {ECO:0000313|EMBL:KAJ50056.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
CheC-like family protein
L3_072_362G1_scaffold_444_3
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2093..3139
DNA (1047bp) protein (349aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
ABC transporter, ATP-binding protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UVH3_9FIRM
ABC transporter
L3_072_362G1_scaffold_444_4
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3120..3800
DNA (681bp) protein (227aa)
D-methionine ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BUU8_9CLOT
D-methionine ABC transporter permease protein {ECO:0000313|EMBL:CDA67888.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
ABC-type metal ion transport system, permease component
L3_072_362G1_scaffold_444_5
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3824..4783
DNA (960bp) protein (320aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:510 RepID=R6CRM5_9CLOT
L-lactate dehydrogenase
L3_072_362G1_scaffold_444_6
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4818..5762
DNA (945bp) protein (315aa)
Lipoprotein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UV08_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_072_362G1_scaffold_444_7
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5779..7185
DNA (1407bp) protein (469aa)
Putative glycolate oxidase, subunit GlcD n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CQM2_9FIRM
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EFE90587.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
FAD linked oxidase domain-containing protein
L3_072_362G1_scaffold_444_8
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7169..8341
DNA (1173bp) protein (391aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Clostridium sp. CAG:510 RepID=R6BXF8_9CLOT
Aminotransferase {ECO:0000313|EMBL:CDA67885.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L3_072_362G1_scaffold_444_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8505..10235
DNA (1731bp) protein (577aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9W7_CLOSW
ABC transporter {ECO:0000313|EMBL:KEZ91154.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter
L3_072_362G1_scaffold_444_10
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10232..12088
DNA (1857bp) protein (619aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9W6_CLOSW
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ91153.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter
L3_072_362G1_scaffold_444_11
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12126..12569
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JP87_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EXG88539.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_362G1_scaffold_444_12
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12662..13477
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V599_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47928.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_072_362G1_scaffold_444_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13976..14947
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2M9_CLOSW
Leucine rich repeats (6 copies) {ECO:0000313|EMBL:EXG84046.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_362G1_scaffold_444_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14966..16294
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2M8_CLOSW
Putative metallopeptidase (DUF2201) {ECO:0000313|EMBL:EXG84045.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_362G1_scaffold_444_15
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16309..17835
DNA (1527bp) protein (509aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2M7_CLOSW
ATPase {ECO:0000313|EMBL:KEZ88586.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ATPase
L3_072_362G1_scaffold_444_16
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17889..18098
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D3ACZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EXG84043.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_362G1_scaffold_444_17
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18549..19892
DNA (1344bp) protein (448aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA35_CLOSW
Methyltransferase, FkbM family {ECO:0000313|EMBL:EXG83403.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
family 2 glycosyl transferase
L3_072_362G1_scaffold_444_18
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20234..21064
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JKT6_9FIRM
Flagellin {ECO:0000313|EMBL:KEZ88085.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
flagellin domain-containing protein
L3_072_362G1_scaffold_444_19
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22400..23116
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K083_9FIRM
4-diphosphocytidyl-2-methyl-D-erythritol synthase
L3_072_362G1_scaffold_444_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23609..26080
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39864.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_072_362G1_scaffold_444_21
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26100..27221
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R074_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42945.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L3_072_362G1_scaffold_444_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27261..27638
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MK76_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE36952.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_362G1_scaffold_444_23
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27653..29662
DNA (2010bp) protein (670aa)
pyruvate-formate lyase (EC:2.3.1.54)
Putative pyruvate-formate lyase {ECO:0000313|EMBL:BAE84805.1}; EC=2.3.1.54 {ECO:0000313|EMBL:BAE84805.1};; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Putative pyruvate-formate lyase n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T37_DESHY
L3_072_362G1_scaffold_444_24
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29669..30529
DNA (861bp) protein (287aa)
Pyruvate-formate lyase-activating enzyme (EC:1.97.1.4)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BJS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO85360.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_072_362G1_scaffold_444_25
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30656..32179
DNA (1524bp) protein (508aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T38_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84804.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_072_362G1_scaffold_444_26
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32183..33712
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T38_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84804.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_072_362G1_scaffold_444_27
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33713..34744
DNA (1032bp) protein (344aa)
FkbM family methyltransferase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JMT3_9FIRM
FkbM family methyltransferase {ECO:0000313|EMBL:EOS35271.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_072_362G1_scaffold_444_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34848..35828
DNA (981bp) protein (327aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06101.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Displaying 28 items

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