ggKbase home page

L3_072_362G1_scaffold_655

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_655_1
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Clostridium sp. CAG:590 RepID=R5EBS4_9CLOT
L3_072_362G1_scaffold_655_2
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(253..672)
DNA (420bp) protein (140aa)
Iron dependent repressor n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9C4_CLOSW
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:EXG88447.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
iron dependent repressor
L3_072_362G1_scaffold_655_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

856..1170
DNA (315bp) protein (105aa)
FeoA family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9B0_CLOSW
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ADL05861.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_362G1_scaffold_655_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1161..1334
DNA (174bp) protein (58aa)
GTP-binding protein HSR1-related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9A9_CLOSW
GTP-binding protein HSR1-like protein
GTP-binding protein HSR1-related protein {ECO:0000313|EMBL:ADL05860.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_362G1_scaffold_655_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1380..2777)
DNA (1398bp) protein (466aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AJD3_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFC98053.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
resolvase family site-specific recombinase
L3_072_362G1_scaffold_655_6
unknown

Not on your lists

3156..3305
DNA (150bp) protein (50aa)

This feature has no annotations

L3_072_362G1_scaffold_655_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3347..4345
DNA (999bp) protein (333aa)
Beta-lactamase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MB34_9CLOT
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AGF55154.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_362G1_scaffold_655_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4828..5334
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNU5_CLOPH
Uncharacterized protein {ECO:0000313|EMBL:KEZ87286.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L3_072_362G1_scaffold_655_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5445..5696
DNA (252bp) protein (84aa)
Beta-lactamase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CQ28_9CLOT
Beta-lactamase {ECO:0000313|EMBL:ERI71342.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
beta-lactamase
L3_072_362G1_scaffold_655_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5824..6165)
DNA (342bp) protein (114aa)
Putative secreted protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SWE3_9CLOT
Putative secreted protein {ECO:0000313|EMBL:CCZ58055.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_072_362G1_scaffold_655_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6536..7813
DNA (1278bp) protein (426aa)
Ferrous iron transport protein B n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABF5_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:EFD00878.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
GTP-binding protein HSR1-like protein
L3_072_362G1_scaffold_655_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7981..9297
DNA (1317bp) protein (439aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9A8_CLOSW
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EXG88429.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
cytochrome c biogenesis protein transmembrane region
L3_072_362G1_scaffold_655_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9302..10816
DNA (1515bp) protein (505aa)
VanW family protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRW9_CLOSY
Putative vancomycin resistance protein {ECO:0000313|EMBL:EXG86370.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
VanW family protein
L3_072_362G1_scaffold_655_14
unknown

Not on your lists

10972..11115
DNA (144bp) protein (48aa)

This feature has no annotations

L3_072_362G1_scaffold_655_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11112..12695
DNA (1584bp) protein (528aa)
Recombinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R998_CLOSW
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EXG88421.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
recombinase
L3_072_362G1_scaffold_655_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12871..13080)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68848.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_072_362G1_scaffold_655_17
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13251..14279
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A3I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ21008.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
LacI family transcriptional regulator
L3_072_362G1_scaffold_655_18
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14471..15787
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B1Q9_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ETO95608.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
extracellular solute-binding protein
L3_072_362G1_scaffold_655_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15858..16901
DNA (1044bp) protein (348aa)
Permease component of ABC-type sugar transporter n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U103_9CLOT
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EKQ53602.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
binding-protein-dependent transport systems inner membrane component
L3_072_362G1_scaffold_655_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16901..17758
DNA (858bp) protein (286aa)
sugar ABC transporter permease n=1 Tax=Blautia producta RepID=UPI000376CCCB
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR33620.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_362G1_scaffold_655_21
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17772..19454
DNA (1683bp) protein (561aa)
Glycosidases (EC:3.2.1.10)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JCN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28897.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_072_362G1_scaffold_655_22
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19480..21150
DNA (1671bp) protein (557aa)
Alpha amylase, catalytic domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L913_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EET62752.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
alpha amylase
L3_072_362G1_scaffold_655_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21225..22145)
DNA (921bp) protein (307aa)
transcriptional regulator n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00036D7DCE
Transcriptional regulator {ECO:0000313|EMBL:KEZ87681.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_362G1_scaffold_655_24
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22239..22877)
DNA (639bp) protein (213aa)
Endo-1,4-beta-xylanase {ECO:0000256|RuleBase:RU362015}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU362015};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Endo-1,4-beta-xylanase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R4E5_9CLOT
glycosyl hydrolase family 11
L3_072_362G1_scaffold_655_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23376..25013
DNA (1638bp) protein (546aa)
Resolvase protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CNH4_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI68876.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
resolvase
L3_072_362G1_scaffold_655_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25021..25764
DNA (744bp) protein (248aa)
Ferrous iron transport B domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R997_CLOSW
ferrous iron transport B domain-containing protein
Ferrous iron transport B domain protein {ECO:0000313|EMBL:ADL05848.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_362G1_scaffold_655_27
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25830..26057
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R996_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG88419.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
Displaying 27 items

View Taxonomy