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L3_072_362G1_scaffold_494

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_362G1_scaffold_494_1
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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322..504
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DL48_9LACO
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR10505.1}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
L3_072_362G1_scaffold_494_2
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(501..989)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IKZ4_LACSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKI04297.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_3
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1124..1885
DNA (762bp) protein (254aa)
spoU; 23S rRNA methyltransferase RumA (EC:2.1.1.-)
23S rRNA methyltransferase n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FY11_9LACO
23S rRNA methyltransferase {ECO:0000313|EMBL:EIA33348.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
L3_072_362G1_scaffold_494_4
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1994..2518
DNA (525bp) protein (175aa)
Hydrolase, HD superfamily n=6 Tax=Lactobacillus salivarius RepID=D8IKZ6_LACSC
Hydrolase, HD superfamily
HD domain protein {ECO:0000313|EMBL:EEJ74637.1}; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
L3_072_362G1_scaffold_494_5
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2660..3007
DNA (348bp) protein (116aa)
Transcriptional regulator, MarR family n=4 Tax=Lactobacillus salivarius RepID=Q1WTZ0_LACS1
Transcriptional regulator, MarR family
MarR family transcriptional regulator {ECO:0000313|EMBL:AKI04300.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_6
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3353..4399
DNA (1047bp) protein (349aa)
pheS; Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (PheRS) (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Lactobacillus salivarius RepID=SYFA_LACS1
L3_072_362G1_scaffold_494_7
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4406..6823
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IKZ8_LACSC
pheT; phenylalanyl-tRNA synthetase subunit beta
Phenylalanyl-tRNA synthetase subunit beta {ECO:0000313|EMBL:AKI04302.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_8
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6976..8115
DNA (1140bp) protein (380aa)
Uncharacterized protein n=4 Tax=Lactobacillus salivarius RepID=D8IKZ9_LACSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA33353.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
L3_072_362G1_scaffold_494_9
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8138..8779
DNA (642bp) protein (214aa)
udk; Uridine kinase (EC:2.7.1.48)
Uridine kinase n=8 Tax=Lactobacillus salivarius RepID=URK_LACS1
Uridine kinase {ECO:0000313|EMBL:AKI04304.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_10
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8796..9266
DNA (471bp) protein (157aa)
Transcription elongation factor n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DJ29_9LACO
greA; Transcription elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
L3_072_362G1_scaffold_494_11
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9774..10736)
DNA (963bp) protein (321aa)
uRH; Inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:AIR10516.1}; EC=3.2.2.1 {ECO:0000313|EMBL:AIR10516.1};; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IL02_LACSC
L3_072_362G1_scaffold_494_12
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10991..11503
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius ACS-116-V-Col5a RepID=E1JQ58_9LACO
Uncharacterized protein {ECO:0000313|EMBL:AKI04307.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
hypothetical protein
L3_072_362G1_scaffold_494_13
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11520..12410
DNA (891bp) protein (297aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IL04_LACSC
50S ribosomal protein L11 methyltransferase
50S ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AKI04308.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_14
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12410..13147
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IL05_LACSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKI04309.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_362G1_scaffold_494_15
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13181..15400
DNA (2220bp) protein (740aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=2 Tax=Lactobacillus salivarius RepID=Q1WTY0_LACS1
GTP pyrophosphokinase {ECO:0000313|EMBL:EIA33361.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
L3_072_362G1_scaffold_494_16
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15415..15861
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Lactobacillus salivarius ACS-116-V-Col5a RepID=E1JQ62_9LACO
L3_072_362G1_scaffold_494_17
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15866..16480
DNA (615bp) protein (205aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IL07_LACSC
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EFK78927.1}; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
L3_072_362G1_scaffold_494_18
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16547..16999
DNA (453bp) protein (151aa)
lspA; Lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
Lipoprotein signal peptidase n=2 Tax=Lactobacillus salivarius RepID=C2EF99_9LACO
L3_072_362G1_scaffold_494_19
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16986..17882
DNA (897bp) protein (299aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
Pseudouridine synthase n=1 Tax=Lactobacillus salivarius ACS-116-V-Col5a RepID=E1JQ65_9LACO
L3_072_362G1_scaffold_494_20
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18090..18626
DNA (537bp) protein (179aa)
pyrR; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=7 Tax=Lactobacillus salivarius RepID=PYRR_LACS1
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1041521 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius GJ-24.;"
L3_072_362G1_scaffold_494_21
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18653..19960
DNA (1308bp) protein (436aa)
Uracil permease n=2 Tax=Lactobacillus salivarius RepID=D8IL09_LACSC
uraA; Uracil permease
Putative permease {ECO:0000313|EMBL:EFK78896.1}; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
L3_072_362G1_scaffold_494_22
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20022..21122
DNA (1101bp) protein (367aa)
carA; Carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
Carbamoyl-phosphate synthase small chain n=5 Tax=Lactobacillus salivarius RepID=D8IL10_LACSC
L3_072_362G1_scaffold_494_23
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21100..23049
DNA (1950bp) protein (650aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate synthetase ammonia chain) (EC:6.3.5.5)
Carbamoyl-phosphate synthetase, large subunit, oligomerization domain protein n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EFA4_9LACO
L3_072_362G1_scaffold_494_24
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23028..23741
DNA (714bp) protein (238aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
Orotidine 5'-phosphate decarboxylase n=4 Tax=Lactobacillus salivarius RepID=PYRF_LACS1
L3_072_362G1_scaffold_494_25
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23741..24361
DNA (621bp) protein (207aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
pyrE; Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=3 Tax=Lactobacillus salivarius RepID=C2EFA6_9LACO
L3_072_362G1_scaffold_494_26
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24475..25431
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family n=3 Tax=Lactobacillus salivarius RepID=C2EFA7_9LACO
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGL99490.1}; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
Transcriptional regulators, LysR family
L3_072_362G1_scaffold_494_27
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25457..26377
DNA (921bp) protein (307aa)
Probable manganese-dependent inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00207}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00207};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00207}; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Probable manganese-dependent inorganic pyrophosphatase n=2 Tax=Lactobacillus salivarius RepID=C2EFA8_9LACO
L3_072_362G1_scaffold_494_28
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26563..27315
DNA (753bp) protein (251aa)
Transcriptional regulator, DeoR family n=2 Tax=Lactobacillus salivarius RepID=E1JQ74_9LACO
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CDK34764.1}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
DeoR family transcriptional regulator
L3_072_362G1_scaffold_494_29
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27375..28538
DNA (1164bp) protein (388aa)
araT; Aromatic amino acid aminotransferase (EC:2.6.1.57)
N-acetyl-L,L-diaminopimelate aminotransferase {ECO:0000313|EMBL:CDK34765.1}; EC=2.6.1.- {ECO:0000313|EMBL:CDK34765.1};; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
N-acetyl-L,L-diaminopimelate aminotransferase n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DM91_9LACO
L3_072_362G1_scaffold_494_30
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28608..29378
DNA (771bp) protein (257aa)
murI; Glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
Glutamate racemase n=4 Tax=Lactobacillus salivarius RepID=D8IL18_LACSC
Displaying items 1-30 of 35 in total

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