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L3_079_000G1_scaffold_3445

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_3445_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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304..789
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D1K422_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54172.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000G1_scaffold_3445_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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776..1288
DNA (513bp) protein (171aa)
Sigma-70 region 2 n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R9M6_9BACE
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS27848.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
RNA polymerase sigma70 factor
L3_079_000G1_scaffold_3445_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1275..1805
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3H4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS54174.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000G1_scaffold_3445_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1802..2260
DNA (459bp) protein (153aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYG4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98567.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_3445_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2515..3186)
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYG5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET14456.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000G1_scaffold_3445_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3516..5315
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HBP9_BACVU
MutS domain III family protein {ECO:0000313|EMBL:KDS27854.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
DNA mismatch repair protein MutS
L3_079_000G1_scaffold_3445_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5410..5949)
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYG7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98570.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_3445_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6068..6493)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBA5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS54181.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000G1_scaffold_3445_9
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6904..7392)
DNA (489bp) protein (163aa)
50S ribosomal protein L17 n=6 Tax=Bacteroides RepID=RL17_BACV8
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_079_000G1_scaffold_3445_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7396..8388)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
DNA-directed RNA polymerase subunit alpha n=15 Tax=root RepID=RPOA_BACV8
DNA-directed RNA polymerase subunit alpha
L3_079_000G1_scaffold_3445_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8400..9005)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=11 Tax=Bacteroides RepID=RS4_BACV8
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_079_000G1_scaffold_3445_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9122..9511)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=14 Tax=Bacteroides RepID=RS11_BACV8
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_3445_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9523..9903)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=6 Tax=Bacteroides RepID=RS13_BACV8
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying 13 items

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