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L3_079_000G1_scaffold_4796

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_4796_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..758)
DNA (756bp) protein (252aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Beta galactosidase small chain n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3F8_BACVU
glycoside hydrolase
L3_079_000G1_scaffold_4796_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(772..1374)
DNA (603bp) protein (201aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q3T2_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56844.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000G1_scaffold_4796_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1371..1652)
DNA (282bp) protein (94aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6L042_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_4796_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1767..3284)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8WEH1_9BACE
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF19080.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
starch-binding protein
L3_079_000G1_scaffold_4796_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3305..6433)
DNA (3129bp) protein (1043aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEL6_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS02503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000G1_scaffold_4796_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6731..7987)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HF11_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02504.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000G1_scaffold_4796_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8089..8694
DNA (606bp) protein (202aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Ribonuclease HII n=8 Tax=root RepID=RNH2_BACV8
L3_079_000G1_scaffold_4796_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8982..9620)
DNA (639bp) protein (213aa)
L-fucose:H+ symporter permease n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFD7_BACVU
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EFG19610.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
major facilitator transporter
L3_079_000G1_scaffold_4796_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9733..11508)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
L3_079_000G1_scaffold_4796_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11530..12510)
DNA (981bp) protein (327aa)
Transcriptional regulator, FucR n=4 Tax=Bacteroides RepID=A6L049_BACV8
transcriptional regulator, FucR
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EET13919.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000G1_scaffold_4796_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12959..14473
DNA (1515bp) protein (505aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L3_079_000G1_scaffold_4796_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14576..14803
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P405_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS56854.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
Displaying 12 items

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