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L3_079_000G1_scaffold_2056

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_2056_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(501..1580)
DNA (1080bp) protein (360aa)
Putative lipoprotein n=2 Tax=Bacteroides vulgatus RepID=A6KWI6_BACV8
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KDS54612.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000G1_scaffold_2056_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1877..2665
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3R6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18977.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_079_000G1_scaffold_2056_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2648..3532)
DNA (885bp) protein (295aa)
Lactate dehydrogenase and related dehydrogenase n=5 Tax=Bacteroides RepID=A6KWI8_BACV8
lactate dehydrogenase-like protien
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein {ECO:0000313|EMBL:KDS26473.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000G1_scaffold_2056_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3639..4421
DNA (783bp) protein (261aa)
DnaJ domain protein n=7 Tax=Bacteroides RepID=A6KWI9_BACV8
DnaJ domain-containing protein
DnaJ like chaperone {ECO:0000313|EMBL:EOS04065.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_2056_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4496..6064)
DNA (1569bp) protein (523aa)
Peptide chain release factor 3 n=7 Tax=Bacteroides RepID=A6KWJ0_BACV8
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptide chain release factor 3
L3_079_000G1_scaffold_2056_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6071..6928)
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase n=6 Tax=Bacteroides RepID=C6Z327_9BACE
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIY77685.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2056_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6943..7485)
DNA (543bp) protein (181aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3R8D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04068.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000G1_scaffold_2056_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7557..8216)
DNA (660bp) protein (220aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6KWJ3_BACV8
hypothetical protein
LysE type translocator family protein {ECO:0000313|EMBL:KDS54619.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000G1_scaffold_2056_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8367..12071
DNA (3705bp) protein (1235aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Putative phosphoribosylformylglycinamidine synthase n=2 Tax=Bacteroides RepID=A6KWJ4_BACV8
L3_079_000G1_scaffold_2056_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12149..16165
DNA (4017bp) protein (1339aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8R6_BACVU
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EFG17729.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_079_000G1_scaffold_2056_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16170..16718
DNA (549bp) protein (183aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=C6Z332_9BACE
chromate transport protein
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EIY77680.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2056_12
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16715..17287
DNA (573bp) protein (191aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=A6KWJ7_BACV8
chromate transport protein
Chromate transporter {ECO:0000313|EMBL:EFV66105.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000G1_scaffold_2056_13
unknown

Not on your lists

17326..17454
DNA (129bp) protein (43aa)

This feature has no annotations

L3_079_000G1_scaffold_2056_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17432..18931)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z334_9BACE
secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77678.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2056_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19013..21814
DNA (2802bp) protein (934aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZRG0_BACVU
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
UvrABC SOS-repair system protein excinuclease A
L3_079_000G1_scaffold_2056_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22060..23091
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase family protein n=11 Tax=Bacteroides RepID=C3R8E1_9BACE
endonuclease/exonuclease/phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EIY77676.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2056_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23148..25454
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZQ39_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18963.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
beta-N-acetylhexosaminidase
L3_079_000G1_scaffold_2056_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25564..26055)
DNA (492bp) protein (164aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KWK2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04078.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_2056_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26074..26295)
DNA (222bp) protein (74aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6KWK3_BACV8
membrane protein
Putative membrane protein {ECO:0000313|EMBL:KDS26376.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000G1_scaffold_2056_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26282..27712)
DNA (1431bp) protein (477aa)
Carbon starvation protein A n=5 Tax=Bacteroides RepID=A6KWK4_BACV8
carbon starvation protein A
Carbon starvation CstA family protein {ECO:0000313|EMBL:KDS54631.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000G1_scaffold_2056_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27791..29470
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S6_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17739.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_000G1_scaffold_2056_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29636..29851
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZQ34_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18958.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000G1_scaffold_2056_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29819..30817)
DNA (999bp) protein (333aa)
Toxin-antitoxin system, toxin component, Fic family n=4 Tax=Bacteroides RepID=D4V8S7_BACVU
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABR37820.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000G1_scaffold_2056_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30820..31413)
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6KWK7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04084.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 24 items

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