ggKbase home page

L3_079_000G1_scaffold_2284

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_2284_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V699_BACVU
chemotaxis protein CheY
Uncharacterized protein {ECO:0000313|EMBL:EIY78736.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2284_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

637..3708
DNA (3072bp) protein (1024aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=root RepID=C6Z3W7_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS27762.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_000G1_scaffold_2284_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3720..5339
DNA (1620bp) protein (540aa)
Outer membrane protein n=5 Tax=root RepID=E5UPX6_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV68770.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_079_000G1_scaffold_2284_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5508..7022
DNA (1515bp) protein (505aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V6A2_BACVU
Right handed beta helix region family protein {ECO:0000313|EMBL:KDS27760.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
xylose ABC transporter
L3_079_000G1_scaffold_2284_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7129..7626)
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z3W4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15573.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_000G1_scaffold_2284_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7835..8644)
DNA (810bp) protein (270aa)
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=7 Tax=Bacteroides RepID=A6KXZ2_BACV8
Class II Aldolase and Adducin N-terminal domain protein {ECO:0000313|EMBL:KDS27758.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000G1_scaffold_2284_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8730..9749)
DNA (1020bp) protein (340aa)
L-rhamnose/H+ symporter n=5 Tax=Bacteroides RepID=A6KXZ1_BACV8
rhamnose-proton symporter
Uncharacterized protein {ECO:0000313|EMBL:EIY78745.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2284_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9842..11095)
DNA (1254bp) protein (418aa)
sugar isomerase (EC:5.3.1.14)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L-rhamnose isomerase n=14 Tax=Bacteroides RepID=A6KXZ0_BACV8
L3_079_000G1_scaffold_2284_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11138..12616)
DNA (1479bp) protein (493aa)
Rhamnulokinase {ECO:0000313|EMBL:EET15569.1}; EC=2.7.1.5 {ECO:0000313|EMBL:EET15569.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Rhamnulokinase n=4 Tax=root RepID=C6Z3W0_9BACE
rhamnulose kinase/L-fuculose kinase
L3_079_000G1_scaffold_2284_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12923..13399
DNA (477bp) protein (159aa)
Arginine repressor n=8 Tax=root RepID=ARGR_BACV8
transcriptional regulator
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2284_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13422..13979
DNA (558bp) protein (186aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXY7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98500.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000G1_scaffold_2284_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14080..15288
DNA (1209bp) protein (403aa)
Argininosuccinate synthase n=11 Tax=Bacteroides RepID=A6KXY6_BACV8
argininosuccinate synthase
Argininosuccinate synthase {ECO:0000313|EMBL:EIY78750.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_2284_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15294..15446
DNA (153bp) protein (51aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3PYJ6_9BACE
L3_079_000G1_scaffold_2284_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15476..16066
DNA (591bp) protein (197aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=11 Tax=Bacteroides RepID=B6VV71_9BACE
N-acetyl-gamma-glutamyl-phosphate reductase
L3_079_000G1_scaffold_2284_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16080..17204
DNA (1125bp) protein (375aa)
Aminotransferase, class III n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V6B2_BACVU
Aminotransferase class-III family protein {ECO:0000313|EMBL:KDS27750.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
acetylornithine aminotransferase
L3_079_000G1_scaffold_2284_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17388..18161
DNA (774bp) protein (258aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyrroline-5-carboxylate reductase n=7 Tax=Bacteroides RepID=A6KXY3_BACV8
pyrroline-5-carboxylate reductase
L3_079_000G1_scaffold_2284_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18344..19234
DNA (891bp) protein (297aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroides RepID=C6Z3V3_9BACE
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABR38296.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000G1_scaffold_2284_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19227..19457)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V6B5_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG18698.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
cytochrome c binding protein
L3_079_000G1_scaffold_2284_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19567..20934
DNA (1368bp) protein (456aa)
Putative glycoside hydrolase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P285_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY78755.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycoside hydrolase
Displaying 19 items

View Taxonomy