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L3_079_000G1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_8_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..801
DNA (801bp) protein (267aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8X2_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EEG32116.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_079_000G1_scaffold_8_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

838..2097
DNA (1260bp) protein (420aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQ15_9FIRM
L3_079_000G1_scaffold_8_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2175..2669
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77262.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
GCN5-like N-acetyltransferase
L3_079_000G1_scaffold_8_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2737..3045)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38608.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_079_000G1_scaffold_8_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3154..3396)
DNA (243bp) protein (81aa)
PF06135 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GYU3_9CLOT
PF06135 family protein {ECO:0000313|EMBL:EJF38300.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_079_000G1_scaffold_8_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3472..5847)
DNA (2376bp) protein (792aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
pheT; Phenylalanine-tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. MSTE9 RepID=J0MVE2_9CLOT
L3_079_000G1_scaffold_8_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5877..6896)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Clostridium sporosphaeroides RepID=UPI000369ED0C
phenylalanyl-tRNA synthetase subunit alpha
L3_079_000G1_scaffold_8_8
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7377..8861
DNA (1485bp) protein (495aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NKT5_9FIRM
L3_079_000G1_scaffold_8_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8895..10409
DNA (1515bp) protein (505aa)
YjeF domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU46_9CLOT
YjeF domain protein {ECO:0000313|EMBL:EDO61692.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
carbohydrate kinase
L3_079_000G1_scaffold_8_10
unknown

Not on your lists

10433..10930
DNA (498bp) protein (166aa)

This feature has no annotations

L3_079_000G1_scaffold_8_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11133..11504
DNA (372bp) protein (124aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
mRNA interferase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H5T0_9CLOT
transcriptional modulator of MazE/toxin MazF
L3_079_000G1_scaffold_8_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11533..11736
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003714D6A
Uncharacterized protein {ECO:0000313|EMBL:EJF40929.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_079_000G1_scaffold_8_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11748..12014
DNA (267bp) protein (89aa)
coat F domain protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003619FE3
Coat F domain protein {ECO:0000313|EMBL:EJF40914.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
coat F domain-containing protein
L3_079_000G1_scaffold_8_14
unknown

Not on your lists

12014..12169
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_000G1_scaffold_8_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12147..13058
DNA (912bp) protein (304aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium sp. MSTE9 RepID=J1H6F0_9CLOT
sigma-E processing peptidase SpoIIGA
L3_079_000G1_scaffold_8_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13058..13780
DNA (723bp) protein (241aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368625D
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
sigE; RNA polymerase sigma-E factor
L3_079_000G1_scaffold_8_17
unknown

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13788..13937
DNA (150bp) protein (50aa)

This feature has no annotations

L3_079_000G1_scaffold_8_18
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13871..15418)
DNA (1548bp) protein (516aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF08173.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
L3_079_000G1_scaffold_8_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15621..15794)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BDQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80073.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_079_000G1_scaffold_8_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15941..17287)
DNA (1347bp) protein (449aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WXW0_9CLOT
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EJF41131.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_079_000G1_scaffold_8_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17322..17702)
DNA (381bp) protein (127aa)
OsmC family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6L5_9CLOT
OsmC family protein {ECO:0000313|EMBL:EHJ01082.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
osmC; stress-induced protein OsmC
L3_079_000G1_scaffold_8_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17829..18599)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6M8_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
sigG; RNA polymerase sigma-G factor
L3_079_000G1_scaffold_8_23
unknown

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18744..19025
DNA (282bp) protein (94aa)

This feature has no annotations

L3_079_000G1_scaffold_8_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19031..20056
DNA (1026bp) protein (342aa)
Putative thiamin biosynthesis lipoprotein ApbE n=2 Tax=Clostridium perfringens RepID=B1R3I9_CLOPF
thiamin biosynthesis lipoprotein ApbE
Putative thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EDT25336.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_079_000G1_scaffold_8_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20053..20448
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89220.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_079_000G1_scaffold_8_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20461..21000
DNA (540bp) protein (180aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNK6_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT73302.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_079_000G1_scaffold_8_27
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21063..21668
DNA (606bp) protein (202aa)
Pentapeptide repeat protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ80_CLOPH
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ABX42492.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_079_000G1_scaffold_8_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21703..22236)
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ppa; Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9MCL6_9FIRM
L3_079_000G1_scaffold_8_29
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22403..22696
DNA (294bp) protein (98aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Clostridium sp. CAG:557 RepID=R6HBR3_9CLOT
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDB23622.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
sporulation protein, YlmC/YmxH family
L3_079_000G1_scaffold_8_30
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22862..23614
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. CAG:964 RepID=R6VEM4_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
SSU ribosomal protein S2P
Displaying items 1-30 of 251 in total

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