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L3_079_000G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 247 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_11_1
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

439..1137
DNA (699bp) protein (233aa)
Spore cortex-lytic enzyme n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDX4_9FIRM
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CCY89895.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
spore cortex-lytic protein
L3_079_000G1_scaffold_11_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1181..1834)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MY29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89897.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_11_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1938..2522)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89899.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_11_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2519..4051)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MX24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89901.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_11_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4158..5228)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MED6_9FIRM
L3_079_000G1_scaffold_11_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5334..7058)
DNA (1725bp) protein (575aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDY4_9FIRM
L3_079_000G1_scaffold_11_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7475..8143)
DNA (669bp) protein (223aa)
Putative proton-coupled thiamine transporter YuaJ n=2 Tax=root RepID=R5MY42_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CCY89907.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Predicted membrane protein
L3_079_000G1_scaffold_11_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8580..8954)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11431.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_079_000G1_scaffold_11_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9280..9576
DNA (297bp) protein (99aa)
TrpR family protein YerC/YecD n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDZ0_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CCY89910.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
TrpR-related protein YerC/YecD
L3_079_000G1_scaffold_11_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9579..10328
DNA (750bp) protein (250aa)
Methyltransferase domain protein n=2 Tax=root RepID=R5MX31_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CCY89911.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Methyltransferase domain.
L3_079_000G1_scaffold_11_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10321..11196
DNA (876bp) protein (292aa)
33 kDa chaperonin n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEE1_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Disulfide bond chaperones of the HSP33 family
L3_079_000G1_scaffold_11_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11275..12195)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89915.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_11_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12179..12904)
DNA (726bp) protein (242aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MY56_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY89917.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_11_14
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12919..14649)
DNA (1731bp) protein (577aa)
PKD domain containing protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDZ9_9FIRM
PKD domain containing protein {ECO:0000313|EMBL:CCY89920.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
listeria-bacteroides repeat domain (list_Bact_rpt)
L3_079_000G1_scaffold_11_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14895..16649
DNA (1755bp) protein (585aa)
aspS3; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=root RepID=R5MX40_9FIRM
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CCY89921.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_11_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16687..16974
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEF1_9FIRM
glutamyl-tRNA(Gln) amidotransferase subunit C
L3_079_000G1_scaffold_11_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16983..18446
DNA (1464bp) protein (488aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.- 6.3.5.6 6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=3 Tax=root RepID=R5ME06_9FIRM
L3_079_000G1_scaffold_11_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18461..19891
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=3 Tax=root RepID=R5ME11_9FIRM
glutamyl-tRNA(Gln) amidotransferase subunit B
L3_079_000G1_scaffold_11_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19891..20712
DNA (822bp) protein (274aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MY76_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CCY89932.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
HAD-superfamily hydrolase, subfamily IIB
L3_079_000G1_scaffold_11_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20779..22488)
DNA (1710bp) protein (570aa)
Peptidase M23 family n=2 Tax=root RepID=R5MEG1_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CCY89933.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Membrane proteins related to metalloendopeptidases
L3_079_000G1_scaffold_11_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22549..24582)
DNA (2034bp) protein (678aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Eubacterium sp. CAG:180 RepID=R5ME15_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCY89935.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_11_22
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24621..26294)
DNA (1674bp) protein (558aa)
DAK2 domain fusion protein YloV n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MY81_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:CCY89937.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
DAK2 domain fusion protein YloV
L3_079_000G1_scaffold_11_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26311..26664)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89939.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_11_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26766..28289)
DNA (1524bp) protein (508aa)
Extracellular solute-binding protein family 5 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MX61_9FIRM
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCY89941.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
family 5 extracellular solute-binding protein
L3_079_000G1_scaffold_11_25
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28305..29087)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=root RepID=R5MEH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89943.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ymdB; putative protein ymdB
L3_079_000G1_scaffold_11_26
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29174..30841)
DNA (1668bp) protein (556aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Ribonuclease Y n=2 Tax=root RepID=R5ME25_9FIRM
metal dependent phosphohydrolase
L3_079_000G1_scaffold_11_27
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31018..32130)
DNA (1113bp) protein (371aa)
ABC transporter solute-binding protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MY94_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CCY89947.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ABC transporter substrate-binding protein
L3_079_000G1_scaffold_11_28
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32147..32968)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NVC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12359.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
binding-protein-dependent transport system inner membrane protein
L3_079_000G1_scaffold_11_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32965..33789)
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=root RepID=R5MEJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89963.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_079_000G1_scaffold_11_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33793..34947)
DNA (1155bp) protein (385aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
TOBE domain protein n=3 Tax=root RepID=R5MJT8_9FIRM
Displaying items 1-30 of 247 in total

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