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L3_079_000G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_22_1
unknown

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_079_000G1_scaffold_22_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125..973)
DNA (849bp) protein (283aa)
Repeat protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A882_BIFAD
Repeat protein {ECO:0000313|EMBL:EDN81947.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_079_000G1_scaffold_22_3
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1120..2763)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DKL4_BIFLN
Cna protein B-type domain protein {ECO:0000313|EMBL:KFI82638.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_22_4
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2872..7266)
DNA (4395bp) protein (1465aa)
LPXTG-domain and cell wall anchor domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZD0_9BIFI
LPXTG-domain and cell wall anchor domain-containing protein {ECO:0000313|EMBL:EFV37041.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Cell surface protein
L3_079_000G1_scaffold_22_5
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7499..8512)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGU0_BIFBR
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:KFI59928.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_000G1_scaffold_22_6
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8768..9859)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGU0_BIFBR
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:KFI59928.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_000G1_scaffold_22_7
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9949..10179)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DRQ5_BIFLD
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:KFJ05098.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_8
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10176..10778)
DNA (603bp) protein (201aa)
ATPase for chromosome partitioning n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DRQ6_BIFLD
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:KFJ05098.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
soj2; chromosome partitioning ATPase
L3_079_000G1_scaffold_22_9
unknown

Not on your lists

comp(10885..11142)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_079_000G1_scaffold_22_10
unknown

Not on your lists

comp(11202..11471)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_079_000G1_scaffold_22_11
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11567..12073)
DNA (507bp) protein (169aa)
Transcriptional regulator WhiB n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSB2_BIFBR
Transcription regulator WhiB superfamily protein {ECO:0000313|EMBL:KFJ05100.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_12
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12073..13356)
DNA (1284bp) protein (428aa)
Zinc finger protein 575 n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZD6_9BIFI
Zinc finger domain-containing protein {ECO:0000313|EMBL:KFJ05101.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_13
unknown

Not on your lists

comp(13353..13520)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_079_000G1_scaffold_22_14
unknown

Not on your lists

comp(13517..13780)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_079_000G1_scaffold_22_15
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13767..14543)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E1N8U4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFJ05102.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_16
unknown

Not on your lists

comp(14527..14712)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_079_000G1_scaffold_22_17
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14709..15074)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUL1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFJ05104.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_18
unknown

Not on your lists

comp(15067..15306)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_079_000G1_scaffold_22_19
unknown

Not on your lists

comp(15299..15565)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_079_000G1_scaffold_22_20
unknown

Not on your lists

comp(15555..15926)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_079_000G1_scaffold_22_21
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16063..16287)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DD76_BIFLN
Xre family transcriptional regulator {ECO:0000313|EMBL:KFJ05110.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L3_079_000G1_scaffold_22_22
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17006..17611
DNA (606bp) protein (202aa)
Peptidase, M23 family n=2 Tax=Bifidobacterium dentium RepID=E0Q672_9BIFI
Peptidase, M23 family {ECO:0000313|EMBL:KFI83753.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_22_23
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17671..19485
DNA (1815bp) protein (605aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KFI83754.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI83754.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
fadD1; long-chain-fatty-acid--CoA ligase (EC:1.13.12.7)
AMP-binding enzyme n=2 Tax=Bifidobacterium dentium RepID=E0Q673_9BIFI
L3_079_000G1_scaffold_22_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19616..21160)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XWM3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI83755.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_22_25
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21290..22507)
DNA (1218bp) protein (406aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTS0_9BIFI
L3_079_000G1_scaffold_22_26
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22562..23749
DNA (1188bp) protein (396aa)
Inosine 5-monophosphate dehydrogenase {ECO:0000313|EMBL:KFI61670.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KFI61670.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
guaC; GMP reductase,fadD1 Long-chain-fatty-acid--CoA ligase (EC:1.1.1.205)
GuaC GMP reductase,fadD1 Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAJ7_BIFDB
L3_079_000G1_scaffold_22_27
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23889..24371
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=E4VA06_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI86936.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_22_28
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24428..26512
DNA (2085bp) protein (695aa)
Long-chain-fatty acid CoA ligase {ECO:0000313|EMBL:KFI86937.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI86937.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Possible long-chain-fatty acid CoA ligase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1H7_BIFAA
fadD3; long-chain-fatty acid CoA ligase
L3_079_000G1_scaffold_22_29
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26551..27033
DNA (483bp) protein (161aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Peptide deformylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5U6_BIFAD
peptide deformylase
L3_079_000G1_scaffold_22_30
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27261..28082
DNA (822bp) protein (274aa)
30S ribosomal protein S2 n=4 Tax=Bifidobacterium RepID=RS2_BIFAA
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
30S ribosomal protein S2
Displaying items 1-30 of 231 in total

View Taxonomy