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L3_079_000G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_34_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3H0_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EOS62427.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
entA; putative electron transfer flavoprotein alpha subunit
L3_079_000G1_scaffold_34_2
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(139..939)
DNA (801bp) protein (267aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TGC9_9FIRM
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CDC72463.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
etfB; electron transfer flavoprotein beta subunit
L3_079_000G1_scaffold_34_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(958..2097)
DNA (1140bp) protein (380aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=2 Tax=Oscillibacter RepID=U2QV39_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERK57493.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2361..3839)
DNA (1479bp) protein (493aa)
abfD; gamma-aminobutyrate metabolism dehydratase/isomerase (EC:4.2.1.- 5.3.3.3)
Gamma-aminobutyrate metabolism dehydratase/isomerase n=2 Tax=Oscillibacter RepID=U2QC19_9FIRM
Gamma-aminobutyrate metabolism dehydratase/isomerase {ECO:0000313|EMBL:ERK57494.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4081..5637)
DNA (1557bp) protein (519aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Acetate CoA-transferase YdiF n=2 Tax=Oscillibacter RepID=U2Q431_9FIRM
acetyl-CoA-transferase subunit
L3_079_000G1_scaffold_34_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5693..6493)
DNA (801bp) protein (267aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Oscillibacter RepID=U2QC58_9FIRM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ERK57496.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6901..8325
DNA (1425bp) protein (475aa)
Sigma-54 interaction domain protein n=2 Tax=Oscillibacter RepID=U2RVB8_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:ERK57498.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Fis family PAS modulated sigma-54 specific transcriptional regulator
L3_079_000G1_scaffold_34_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8342..9673
DNA (1332bp) protein (444aa)
RNA polymerase sigma-54 factor n=2 Tax=Oscillibacter RepID=U2QMU7_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ERK57499.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
RNA polymerase sigma-54 factor
L3_079_000G1_scaffold_34_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9758..10639)
DNA (882bp) protein (294aa)
Putative ribokinase n=2 Tax=Oscillibacter RepID=U2Q435_9FIRM
Putative ribokinase {ECO:0000313|EMBL:ERK57500.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
PfkB domain-containing protein
L3_079_000G1_scaffold_34_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..11604)
DNA (951bp) protein (317aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Oscillibacter RepID=U2QC51_9FIRM
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ERK57501.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
nucleoside hydrolase
L3_079_000G1_scaffold_34_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11621..12778)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QW39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57502.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000G1_scaffold_34_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12950..13960)
DNA (1011bp) protein (337aa)
Putative ribose transport system permease protein RbsC n=2 Tax=Oscillibacter RepID=U2QMV0_9FIRM
Putative ribose transport system permease protein RbsC {ECO:0000313|EMBL:ERK57504.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
inner-membrane translocator
L3_079_000G1_scaffold_34_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13962..15464)
DNA (1503bp) protein (501aa)
Putative sugar ABC transporter, ATP binding protein n=2 Tax=Oscillibacter RepID=U2Q438_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:ERK57505.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC transporter ATP-binding protein
L3_079_000G1_scaffold_34_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15602..16612)
DNA (1011bp) protein (337aa)
Sugar-binding domain protein n=2 Tax=Oscillibacter RepID=U2QLZ4_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:ERK57506.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
LacI family transcriptional regulator
L3_079_000G1_scaffold_34_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17027..17623)
DNA (597bp) protein (199aa)
Putative cysteine/O-acetylserine efflux protein n=2 Tax=Oscillibacter RepID=U2QW98_9FIRM
Putative cysteine/O-acetylserine efflux protein {ECO:0000313|EMBL:ERK57508.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Putative threonine efflux protein
L3_079_000G1_scaffold_34_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17669..18859)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QMV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57509.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted ATPase (AAA+ superfamily)
L3_079_000G1_scaffold_34_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18886..20544)
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Oscillibacter RepID=U2Q443_9FIRM
L3_079_000G1_scaffold_34_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20617..21636)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Oscillibacter RepID=U2QLZ9_9FIRM
L3_079_000G1_scaffold_34_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22435..23781
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Oscillibacter RepID=U2QW94_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23795..25141
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Oscillibacter RepID=U2QMV8_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25260..26933)
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Oscillibacter RepID=U2QHM0_9FIRM
L3_079_000G1_scaffold_34_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27280..28707
DNA (1428bp) protein (476aa)
Na+/H+ antiporter family protein n=2 Tax=Oscillibacter RepID=U2QID9_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:ERK66933.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Na+/H+ antiporter
L3_079_000G1_scaffold_34_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28771..29721)
DNA (951bp) protein (317aa)
Transcriptional regulator, LysR family n=2 Tax=Oscillibacter RepID=U2PZP7_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERK66934.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative LysR family transcriptional regulator
L3_079_000G1_scaffold_34_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30075..31268
DNA (1194bp) protein (398aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=2 Tax=Oscillibacter RepID=U2QHM4_9FIRM
Methionine gamma-lyase {ECO:0000313|EMBL:ERK66935.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_25
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31553..35077)
DNA (3525bp) protein (1175aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
pyruvate-ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSB2_OSCVS
L3_079_000G1_scaffold_34_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35174..36355)
DNA (1182bp) protein (394aa)
putative aspartate aminotransferase (EC:2.6.1.1)
Putative aspartate transaminase n=2 Tax=Oscillibacter RepID=U2QHJ3_9FIRM
Putative aspartate transaminase {ECO:0000313|EMBL:ERK57019.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_34_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36445..37872)
DNA (1428bp) protein (476aa)
Amino acid carrier protein n=2 Tax=Oscillibacter RepID=U2RTX8_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:ERK57018.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative sodium alanine symporter
L3_079_000G1_scaffold_34_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38296..39060
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family protein n=2 Tax=Oscillibacter RepID=U2QFV8_9FIRM
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:ERK64582.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative IclR family transcriptional regulator
L3_079_000G1_scaffold_34_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39123..41225)
DNA (2103bp) protein (701aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=2 Tax=Oscillibacter RepID=U2PX34_9FIRM
L3_079_000G1_scaffold_34_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41195..42100)
DNA (906bp) protein (302aa)
Ppx/GppA phosphatase family protein n=2 Tax=Oscillibacter RepID=U2QF49_9FIRM
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:ERK64584.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Ppx/GppA phosphatase
Displaying items 1-30 of 152 in total

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