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L3_079_000G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_35_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104..1450
DNA (1347bp) protein (449aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WS27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ69385.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Site-specific recombinase XerD
L3_079_000G1_scaffold_35_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1962..2156)
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9X6C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52654.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
heavy metal transport/detoxification protein
L3_079_000G1_scaffold_35_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2269..3366)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F636_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99009.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_000G1_scaffold_35_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3406..4887)
DNA (1482bp) protein (494aa)
Acetyltransferase n=2 Tax=Clostridium bolteae RepID=R0AKK1_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ52656.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Predicted membrane protein involved in D-alanine export
L3_079_000G1_scaffold_35_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4975..5280)
DNA (306bp) protein (102aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8S154_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13820.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_079_000G1_scaffold_35_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5370..7754)
DNA (2385bp) protein (795aa)
cation transport ATPase (EC:3.6.3.-)
Uncharacterized protein n=5 Tax=Clostridium bolteae RepID=A8S156_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13821.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_000G1_scaffold_35_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8042..10012)
DNA (1971bp) protein (657aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X6D4_9CLOT
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:ENZ10911.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
PTS system transporter subunit IIABC
L3_079_000G1_scaffold_35_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10031..11803)
DNA (1773bp) protein (591aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
oligo-1,6-glucosidase (EC:3.2.1.10)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I4F0_9CLOT
L3_079_000G1_scaffold_35_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11921..12775)
DNA (855bp) protein (285aa)
Cof-like hydrolase n=2 Tax=Clostridium RepID=N9YG98_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:ENZ10913.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative hydrolase
L3_079_000G1_scaffold_35_10
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12922..13701)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FFR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99001.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
RpiR family transcriptional regulator
L3_079_000G1_scaffold_35_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13676..14449)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I4F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13827.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
RpiR family transcriptional regulator
L3_079_000G1_scaffold_35_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14605..15078)
DNA (474bp) protein (158aa)
C_GCAxxG_C_C family protein n=2 Tax=Clostridium RepID=N9X6D9_9CLOT
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:ENZ10916.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
C_GCAxxG_C_C family protein
L3_079_000G1_scaffold_35_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15200..15688)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YT13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10917.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_079_000G1_scaffold_35_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15691..15891)
DNA (201bp) protein (67aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=A8S171_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13833.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_079_000G1_scaffold_35_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16246..17619)
DNA (1374bp) protein (458aa)
Transporter n=2 Tax=Clostridium RepID=G5I4G0_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Na+-dependent transporters of the SNF family
L3_079_000G1_scaffold_35_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17746..18699)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F5Y9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98994.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
inner-membrane translocator
L3_079_000G1_scaffold_35_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18696..19796)
DNA (1101bp) protein (367aa)
Sugar ABC transporter permease n=4 Tax=Clostridium RepID=N9X6E6_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:ENZ10921.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
inner-membrane translocator
L3_079_000G1_scaffold_35_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19793..21349)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8S175_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13837.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC transporter
L3_079_000G1_scaffold_35_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21342..21449)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S176_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13838.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_000G1_scaffold_35_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21526..22728)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8S177_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13839.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
basic membrane lipoprotein
L3_079_000G1_scaffold_35_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22910..27607)
DNA (4698bp) protein (1566aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
DNA polymerase III polC-type n=3 Tax=Clostridium RepID=N9X6Y5_9CLOT
DNA polymerase III subunit alpha
L3_079_000G1_scaffold_35_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27623..28693)
DNA (1071bp) protein (357aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=4 Tax=Clostridium RepID=G5I4G6_9CLOT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_079_000G1_scaffold_35_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28729..29778)
DNA (1050bp) protein (350aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
RIP metalloprotease RseP n=4 Tax=Clostridium RepID=N9YT21_9CLOT
RIP metalloprotease RseP
L3_079_000G1_scaffold_35_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29863..31011)
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Clostridium RepID=N9YGB1_9CLOT
L3_079_000G1_scaffold_35_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31058..31858)
DNA (801bp) protein (267aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Phosphatidate cytidylyltransferase n=4 Tax=Clostridium RepID=N9YRP8_9CLOT
phosphatidate cytidylyltransferase
L3_079_000G1_scaffold_35_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31880..32599)
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Clostridium bolteae RepID=N9ZVC2_9CLOT
L3_079_000G1_scaffold_35_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32730..33281)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=7 Tax=Clostridium RepID=A8S186_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribosome recycling factor
L3_079_000G1_scaffold_35_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33334..34035)
DNA (702bp) protein (234aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YT26_9CLOT
L3_079_000G1_scaffold_35_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34329..34517
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S189_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13851.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_000G1_scaffold_35_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34522..34887)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YGC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51213.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
Displaying items 1-30 of 166 in total

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