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L3_079_000G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_50_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114..629)
DNA (516bp) protein (172aa)
HD domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z4A3_9CLOT
HD domain protein {ECO:0000313|EMBL:EGB91216.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_079_000G1_scaffold_50_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

824..1957
DNA (1134bp) protein (378aa)
Putative LysM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z4A5_9CLOT
Putative LysM domain protein {ECO:0000313|EMBL:EGB91218.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LysM domain.
L3_079_000G1_scaffold_50_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2012..3205
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z4A6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91219.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_079_000G1_scaffold_50_4
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3214..4032
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EBE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97195.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Colicin V production protein.
L3_079_000G1_scaffold_50_5
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4107..4427
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68020.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_079_000G1_scaffold_50_6
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4424..4654
DNA (231bp) protein (77aa)
YgiT-type zinc finger domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAC7_9FIRM
YgiT-type zinc finger domain-containing protein {ECO:0000313|EMBL:EOS68019.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_079_000G1_scaffold_50_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5069..6079)
DNA (1011bp) protein (337aa)
Transcriptional regulators n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV07_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL24615.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_079_000G1_scaffold_50_8
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6246..7433)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Blautia sp. CAG:237 RepID=R6KS27_9FIRM
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDB76305.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L3_079_000G1_scaffold_50_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7464..8207)
DNA (744bp) protein (248aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.- 1.1.1.100)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL24607.1}; EC=1.1.1.- {ECO:0000313|EMBL:CBL24607.1};; EC=1.1.1.100 {ECO:0000313|EMBL:CBL24607.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUZ9_9FIRM
L3_079_000G1_scaffold_50_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8219..9808)
DNA (1590bp) protein (530aa)
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Acetate CoA-transferase YdiF n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV00_9FIRM
L3_079_000G1_scaffold_50_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9823..11454)
DNA (1632bp) protein (544aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:CBL24609.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CBL24609.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV01_9FIRM
L3_079_000G1_scaffold_50_12
bacterium UASB270, Bacteria

Not on your lists

11823..13016
DNA (1194bp) protein (398aa)
oxidoreductase domain-containing protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625AFB
Oxidoreductase domain protein {ECO:0000313|EMBL:GAK56926.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
L3_079_000G1_scaffold_50_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13047..13820
DNA (774bp) protein (258aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.125)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6Y9_9FIRM
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDC16419.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_079_000G1_scaffold_50_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13835..15715
DNA (1881bp) protein (627aa)
Acetolactate synthase catalytic subunit n=1 Tax=Clostridium bolteae 90B8 RepID=R0B9B2_9CLOT
Acetolactate synthase catalytic subunit {ECO:0000313|EMBL:ENZ40842.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
L3_079_000G1_scaffold_50_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15735..16361
DNA (627bp) protein (209aa)
Ribose 5-phosphate isomerase RpiB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M307_9FIRM
Ribose 5-phosphate isomerase RpiB
Ribose 5-phosphate isomerase RpiB {ECO:0000313|EMBL:CBL25619.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_000G1_scaffold_50_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16412..17170
DNA (759bp) protein (253aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RST2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16469.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator, IclR family
L3_079_000G1_scaffold_50_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17219..18136)
DNA (918bp) protein (306aa)
Putative transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0Z448_9CLOT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB91161.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L3_079_000G1_scaffold_50_18
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18411..19784
DNA (1374bp) protein (458aa)
Sugar transporter n=2 Tax=Anaerostipes RepID=E5VVM6_9FIRM
Sugar transporter {ECO:0000313|EMBL:CDC38255.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_079_000G1_scaffold_50_19
bacterium UASB270, Bacteria

Not on your lists

19830..21029
DNA (1200bp) protein (400aa)
oxidoreductase domain-containing protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625AFB
Oxidoreductase domain protein {ECO:0000313|EMBL:GAK56926.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
NADH-dependent dyhydrogenase
L3_079_000G1_scaffold_50_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21251..22432
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVY1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93819.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_079_000G1_scaffold_50_21
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22461..22979
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38105.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
RNA polymerase ECF subfamily sigma factor
L3_079_000G1_scaffold_50_22
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22963..23478
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EF29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98470.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_079_000G1_scaffold_50_23
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23588..25933
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ED53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98468.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
transglutaminase domain-containing protein
L3_079_000G1_scaffold_50_24
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25955..27340
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38102.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_079_000G1_scaffold_50_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28283..28774
DNA (492bp) protein (164aa)
Nitroreductase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GVZ3_9FIRM
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CDE31265.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_079_000G1_scaffold_50_26
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28829..29761
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EAC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98487.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
alpha/beta hydrolase fold-3
L3_079_000G1_scaffold_50_27
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29765..31012
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L2D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB77614.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Alcohol acetyltransferase.
L3_079_000G1_scaffold_50_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31114..31587
DNA (474bp) protein (158aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
NADH dehydrogenase I, E subunit n=1 Tax=Clostridium sp. D5 RepID=F0YXG4_9CLOT
NADH dehydrogenase I, E subunit {ECO:0000313|EMBL:EGB93652.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_079_000G1_scaffold_50_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31592..33496
DNA (1905bp) protein (635aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
Protein HymB n=1 Tax=Clostridium sp. D5 RepID=F0YXG5_9CLOT
Protein HymB {ECO:0000313|EMBL:EGB93653.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_079_000G1_scaffold_50_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33509..35191
DNA (1683bp) protein (561aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Putative [Fe] hydrogenase, large subunit HymC n=1 Tax=Clostridium sp. D5 RepID=F0YXG6_9CLOT
Putative [Fe] hydrogenase, large subunit HymC {ECO:0000313|EMBL:EGB93654.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Displaying items 1-30 of 139 in total

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